KEGG   Capra hircus (goat): 102178539
Entry
102178539         CDS       T02910                                 
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
chx  Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:chx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chx03019]
    102178539 (MEX3D)
   04121 Ubiquitin system [BR:chx04121]
    102178539 (MEX3D)
Enzymes [BR:chx01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102178539 (MEX3D)
Messenger RNA biogenesis [BR:chx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102178539 (MEX3D)
Ubiquitin system [BR:chx04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102178539 (MEX3D)
SSDB
Motif
Pfam: KH_1 zf-C3HC4_3 zf-RING_2 zf-RING_4 zf-C3HC4 Prok-RING_4
Other DBs
NCBI-GeneID: 102178539
NCBI-ProteinID: XP_017905907
UniProt: A0A452EEE1
Position
7:66533407..66541809
AA seq 657 aa
MPSSTGQPDGGGGARGGEPGAPVCGDPSPGPPPPPPPPPPEGADEAAPAPRPPPEPDDAA
AALRLALDQLSGLGLGGAGDQDEEGATAGGGDGARAATGGADGGAAAEPAPPDGPETGAP
GVAVAPGPLPLLEPDVSPPPPPRPSPPDVFAGFAPHPAALGPPTLLAEQMSVIGSRKKSV
NMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAK
REILSAAEHFSVIRATRSKAGGLPGTAQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIK
RIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAHITLRTGAFTDASPDSDFHSN
GTDVCLDLLGAAAGLWAKAPNPGRRPPAPTASLRGDTALGAPGGPESFYAGSRGGPPVPV
PVPDTGPASPYSTSGNGGFTFGGDGPGAPTGPPAPEDCDFGFDFLALDLTVPTAATIWAP
FERATPLPAFGGCSAVNGAPAPPAPGARRSSGTGTPRHSPTLPEPGGLGLELPLARRPTP
DPVGALPWRPPQGSLTSFSSSASFSAATSLPSSSSASSCSALDSSAPESGRKPPVAPAPA
APARECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHIFS
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgcctagctccaccggacagcccgacggcggcgggggcgcgcgcggcggcgaacccggg
gcgccggtctgcggggaccccagcccgggtcccccgccgccgccgccgccgcccccgccc
gagggcgccgatgaggccgcgcccgcgccccggccgccgcccgagcccgacgacgcggcc
gccgcgctgcgcctggccttggaccagctctcggggctggggctggggggcgcgggcgac
caggacgaggagggggcgaccgcgggcggcggagacggagcgcgtgcagcgactgggggc
gcagacggcggggccgcggcggagccggcgccccccgacgggcctgagacgggggcgccc
ggggtggccgtggcccccggcccgctgccgctgctggagccggacgtgagtcccccgccg
ccgcctcggccgtcgccgcccgacgtgttcgcaggcttcgcgccccaccccgcggcgctg
ggccccccgacgctgctggcggagcagatgagcgtgatcggcagccgcaagaagagcgtg
aacatgaccgagtgcgtgcccgtgcccagctccgagcacgtcgccgagatcgtgggtcgc
caggggtgcaagatcaaggctctgagagccaagacgaatacgtacatcaagactccagtg
cgaggggaggagccagtctttatcgtgaccggccgcaaggaggacgtggagatggccaag
cgtgagatcctgtcggctgccgagcacttctctgtgatccgggccacgcggagcaaggcg
ggcgggctgccgggtacggcacagggcccacccaacctgcctggacagaccacgatccag
gtgcgcgtgccctaccgcgtggtggggctggtggtggggcccaagggcgccaccatcaag
cgcatccagcaacggacgcatacgtacatcgtaacgcctgggcgtgacaaggagccggtg
tttgccgtgacgggcatgcctgagaacgtggaccgggcacgcgaggagatcgaggcccat
atcacactgcgcacgggggccttcaccgacgccagccctgacagcgacttccactccaac
ggcacagatgtctgcttggacctgctcggggcggccgcaggcctctgggccaaagccccc
aacccgggccgccggcccccagcacccacagccagccttcgtggggacactgcgctgggc
gccccgggaggccctgagtccttctacgcgggcagccgcggggggccgccggtgcctgtg
ccggtgccggacaccggccccgccagcccctacagcacttctggcaacgggggtttcacc
ttcggtggggacggtcctggggcccccacggggccacccgcccccgaggactgcgacttt
ggcttcgacttcctggcgctggacctgaccgtgcccaccgcggccaccatctgggcgcct
ttcgagcgggccaccccgctgccggcctttggtggctgctcagcggtcaatggggccccc
gcgccgccagccccgggtgcccgacgcagcagcgggaccggcacaccacgccactcaccc
acgctgcccgagcccggtggcctgggcctggagctcccgctggcccgccggcctacgccg
gacccagtaggtgccctgccctggcggcccccacagggctccctgacgtccttctcaagc
agtgccagcttctctgcagccacctcgctgcccagcagctcctcggcctcctcgtgctcg
gcgctggactccagtgcccccgagagtggccgtaagcccccagtggccccggcacctgcg
gccccggcgcgggagtgcgtggtgtgtgccgagggcgaggtgatggccgctctggtaccc
tgcggccacaacctcttctgcatggactgcgccgtccgcatctgcggcaagagcgagcca
gagtgcccagcctgccgcacgcccgccacccaggccatccatatcttttcctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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