KEGG   Capra hircus (goat): 102179935
Entry
102179935         CDS       T02910                                 
Name
(RefSeq) tripartite motif-containing protein 5 isoform X1
  KO
K10648  tripartite motif-containing protein 5 [EC:2.3.2.27]
Organism
chx  Capra hircus (goat)
Pathway
chx03250  Viral life cycle - HIV-1
chx05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102179935
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    102179935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:chx04121]
    102179935
Enzymes [BR:chx01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102179935
Ubiquitin system [BR:chx04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102179935
SSDB
Motif
Pfam: zf-RING_UBOX zf-B_box zf-C3HC4_4 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-C3HC4_3 U-box zf-Nse TRAF3_RING Bacillus_HBL UBZ_FAAP20 zf-RING_11 DUF2278 DUF3835 Apolipoprotein Syntaxin-6_N zf-RING_6 zf-RING_10
Other DBs
NCBI-GeneID: 102179935
NCBI-ProteinID: XP_013832381
Position
15:34790734..34806074
AA seq 346 aa
MASGILMNIQEEVTCPICLELLTEPQSLDCGHTFCQACITANNKEAIIGQEGQKSCPVCR
VSFEPGNLRPNRHVANIVQRLREVKVSPDVEQERNLCAHHGEKLQLFCEQDGKVICWLCE
RSQEHRGHNTFLMEEIAPHYQKMLQSCLQRLKGKKQEAEELEIKVREEMSTWKTQIQTEI
QSVQGEFTKLRQILDSEEAKELRKLKDELGVILKELAESENDLVQEKLLVSSHISDVERR
LQGSTMELLQDVNVILKRSETVALKKPKSFPKEQRRVFRAPDLREILRVFNDQLTPNSSK
RANVISPDQSQAGYASSWQPYDASRCQLSDASSFQRFGAWGSFSGF
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggcttcaggaatcctgatgaacatacaagaggaagtgacctgccccatttgcctggag
cttctgacggaaccccagagccttgactgtggccacaccttctgtcaagcctgtatcact
gcaaacaacaaggaagccataattggccaagaggggcagaaaagctgccctgtctgcaga
gttagttttgagcctgggaacctgcggcctaacaggcatgtggccaatatagtgcagagg
ctccgagaggttaaggtgagcccagacgtggagcaagagagaaatctctgtgctcaccat
ggagagaaactccagctcttctgtgagcaggatgggaaggtcatatgttggctttgcgag
cgatctcaggagcatcgaggtcacaacacattcctcatggaggagattgcaccacactac
cagaaaatgctccaatcatgtctgcagaggctgaaggggaaaaaacaggaagctgaggag
ttggaaattaaagtcagagaagagatgtctacttggaagactcaaatacaaactgagata
caaagtgtccagggagagtttacaaaactaagacaaatcctggacagtgaggaggcgaag
gaactgagaaaactgaaggatgagttgggagttattctcaaagagctggcagaatctgag
aatgatctggtccaagagaagctgttggtgagcagtcacatctcagatgtggagcgccgt
ttgcagggatcaacaatggagctgctgcaggatgtgaatgttatcctgaaaaggagtgaa
accgtggctctgaagaagccaaaatctttccccaaggaacagaggagagtgtttcgagct
cctgatctgagagagatactgcgtgtgtttaatgatcagctgaccccgaattcttctaag
agagcaaatgtcatttctccggatcagagtcaagcaggatatgcatccagttggcaaccc
tatgatgcatcccgctgccaactctctgatgcatccagtttccaacgctttggtgcatgg
ggatccttttcaggattttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (20)   
   Pfam (20)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system