KEGG   Campylobacter hyointestinalis: CHH_0940
Entry
CHH_0940          CDS       T04651                                 
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
chyo  Campylobacter hyointestinalis
Pathway
chyo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:chyo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHH_0940 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chyo03400]
    CHH_0940 (uvrB)
DNA repair and recombination proteins [BR:chyo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CHH_0940 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CHH_0940 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD SWI2_SNF2 Kinesin UB2H AAA_30 Microtub_bd Focal_AT AAA_22 DUF1574 AAA_16 AAA_7 SNO DUF87
Other DBs
NCBI-ProteinID: ANE32594
Position
883457..885433
AA seq 658 aa
MDKFEISSKFKPSDDQEKAVTNIVDSIKSGNKFNVLLGVTGSGKTFTMANVIKRLNMPTL
IMTHNKSLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIPRQDLFIEKDSSINDELER
LRLSATANLLEFDDVIVVASVSANYGLGNPAEYKGMVLLLNIGMSLNQKELLLKLVDMGY
KRNDSYFDRGDFRVNGDVVDIYPAYFNDEAIRLEFFGDELDAMYHFDVLENRRTKDVSKF
ILYATSQFVVGENRLKQAIKDIELELEDRLAFYEKENRLVEYQRLKQRVEFDLEMLSSTG
STKGVENYARYLTGQKPGETPYSLFDYFEVSGKDYLVIVDESHVSLPQFRGMYAGDRSRK
EVLVEYGFRLPSALDNRPLKFDEFIAKKANYLFVSATPNEYEMDLAKGHIYEQILRPTGL
LDPRIEVISSDNQVEVLFDRAKVVIARNERVLVTTLTKKMSEELTRYYLELGIKVKYMHS
DIDAVERNELIRGLRKGEFDMLIGINLLREGLDLPEVSLVAVLDADKEGFLRSRTSLIQT
MGRAARNVNGTVILFANKITNSMKEAIEITEARRKYQDEYNKKHGITPRSASRNLEDSLK
EEDLPNLYNKAKKLEKMPVSERAKIVKELRKQMLEAAKNLEFEKAAALRDEIAKLREL
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggataaatttgagatatctagtaaatttaagccaagcgatgatcaagaaaaagccgta
acaaacatagttgatagcataaaatctggaaataaatttaacgtcctcttaggagtaact
ggaagtggcaagacttttacgatggcaaacgtgataaaacgcctaaatatgccaactctc
attatgacacataacaaaagcttagcagcacaactttatagcgaatttaagggctttttt
cctaaaaatcacgttgagtattttataagctactatgattattaccaacctgaagcctat
ataccgcgtcaagatctttttatagaaaaagatagctctataaatgatgagcttgagcgt
ttaagacttagtgcgactgcaaatttgctcgagtttgatgatgtgatagtagtggcttct
gtatctgcaaactacggtttaggaaatcctgctgagtataaaggtatggttttgttacta
aacataggtatgagcttaaatcaaaaagagctacttttaaagcttgttgatatgggatat
aaaagaaatgattcgtactttgatcgtggggattttcgagtaaatggcgacgtggtagat
atctatccggcgtattttaatgacgaggctataaggcttgagttttttggagacgagctt
gacgcgatgtatcactttgatgtgttagaaaacagacgtacaaaagacgttagtaaattt
atactatatgcgacaagtcagtttgtagtcggagaaaatagactaaaacaggcgataaaa
gatatcgaacttgagcttgaagatagacttgcattttatgaaaaagaaaatagattagtc
gagtatcaaagacttaagcaaagagtggagtttgacctcgagatgctctcaagcaccgga
agcacaaaaggcgtggaaaactacgcacgttacctaactgggcaaaagcctggagagacg
ccatactctttgtttgattactttgaagtcagtggcaaggactaccttgttatagtagat
gaaagtcacgtgagcttgccgcaatttcgcggaatgtacgcaggcgatagaagcagaaaa
gaagttttggttgagtatggttttagacttccatcagcgcttgataatagacctttgaaa
tttgatgagtttatagcaaaaaaggcaaactatctgtttgtttcagccaccccaaacgag
tatgagatggatctcgcaaaaggtcatatttatgagcaaatacttaggcctactggactt
cttgatccacgtatagaagtcataagcagcgataatcaagtagaagttttgtttgataga
gctaaagttgtcatagcaagaaatgagcgagtactagtaactactctaactaaaaagatg
agtgaagagctaactcgatattaccttgagcttggtatcaaggttaaatatatgcactca
gacatcgacgcagtagaaagaaatgagcttataagaggtcttagaaaaggtgagtttgat
atgcttatcggtataaatttgcttcgtgaggggctagatctaccagaagtctctttagta
gcagttttagacgccgataaagagggttttttaagaagtcgcacgagccttatacaaact
atgggaagagcagctagaaacgtgaatggaacggttatattatttgcaaataaaataaca
aattcgatgaaagaagcgattgaaataaccgaggctaggcgaaaatatcaagatgaatac
aacaaaaagcatggcataactccacgctcagctagtagaaatttagaagatagcctaaaa
gaagaagatctaccaaatttatataataaagccaaaaaactagaaaaaatgccagtaagc
gagcgagcaaagatcgtaaaagagctaagaaaacagatgcttgaagcggccaagaatttg
gaatttgaaaaagctgcggccttgagagatgagatagcaaaactcagagaactttaa

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