KEGG   Chryseobacterium sp. StRB126: CHSO_3987
Entry
CHSO_3987         CDS       T03602                                 
Symbol
yliG
Name
(GenBank) MiaB family RNA modification enzyme
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
chz  Chryseobacterium sp. StRB126
Brite
KEGG Orthology (KO) [BR:chz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:chz03009]
    CHSO_3987 (yliG)
Enzymes [BR:chz01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     CHSO_3987 (yliG)
Ribosome biogenesis [BR:chz03009]
 Prokaryotic type
  ribosomal protein modification factors
   CHSO_3987 (yliG)
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 TRAM CLP1_P DUF2670
Other DBs
NCBI-ProteinID: BAP33024
UniProt: A0A077KTT3
Position
complement(4540114..4541415)
AA seq 433 aa
MRTKSVGKKKINVVTLGCSKNVYDSEVLMSQLKANGKEVVHEDRGDIVVINTCGFIDNAK
EESINTILDYVEAKNRGEVEKVFVTGCLSERYKPDLVKEIPDVDQYFGTRDLPMLLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVSEAQKLT
KKGTKELILIAQDLTYYGLDIYKKRALGDLLKELVKVEGVEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLGKFREKVPDMAIRTTLIVGYP
GETEERFQELKDWVKEQKFDRLGCFTYSHEENTGAYVLEDDISQEVKEARVEEIMEVQSQ
ISWEKNQEKVGKVFRCIFDRKEGNYFVGRTEYDSPDVDNTVLVSAEDTYISIGEFADVKI
TSAEEFDLYGELL
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgcgtacaaaatcggtagggaagaaaaaaatcaatgtagttacacttggatgttccaaa
aatgtatatgactctgaagtattaatgagccagctgaaagccaatggaaaagaggtggtt
catgaagaccgtggagatattgttgttattaatacctgcggatttattgataatgctaaa
gaagagtctatcaataccattttagattatgtagaggctaaaaatagaggtgaagtagaa
aaagtattcgttacaggttgtctttccgaaagatacaaaccagacttggttaaagaaatt
ccagatgtagaccagtattttggtacaagagatcttcctatgttattaaagcatcttggt
gcagactataagcatgaattggtaggagagagattaactactactcctaaacattatgca
taccttaaaatttcagaaggatgtgacagaccatgttctttctgcgctattcctttgatg
agaggaggtcacgtttctactcctattgagaagttggtttctgaagctcagaaattgacc
aaaaaaggaaccaaagaattaattcttattgctcaggatctaacgtattatgggttggat
atttataaaaaacgagcattgggagatttgctgaaagagctagtaaaagtagaaggagtg
gagtggatccgtcttcattatgctttcccaagcggttttcctgaggatgttttggatatt
atccgtgaagaacctaaagtttgtaattatatagatattcctcttcagcacatcaattct
gatctgttgaaatcaatgaaaagaggaacaacccatgagaaaacagatgcacttttagga
aaattcagagaaaaagttcccgatatggcaatcagaacaaccctgattgtaggatatccg
ggtgaaactgaagaacgatttcaggaacttaaagactgggtaaaagagcagaaatttgac
agattaggatgctttacctattctcacgaggaaaataccggtgcttatgtattggaagat
gatatttcacaggaagtaaaagaagcaagggtagaagaaatcatggaagtgcagtctcag
atttcttgggaaaagaaccaggaaaaagtagggaaagtgttcagatgtatcttcgatcgt
aaagaagggaactattttgtcggaagaacagaatacgactctccggacgtagataataca
gttttggtatccgctgaagatacttatatttccatcggagaatttgcagacgtgaagatt
acttcagcagaagaattcgacttatacggtgaattattatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

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