KEGG   Citrus x clementina (clementine): CICLE_v10009139mg
Entry
CICLE_v10009139mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K10739  replication factor A2
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03030  DNA replication
cic03420  Nucleotide excision repair
cic03430  Mismatch repair
cic03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CICLE_v10009139mg
   03420 Nucleotide excision repair
    CICLE_v10009139mg
   03430 Mismatch repair
    CICLE_v10009139mg
   03440 Homologous recombination
    CICLE_v10009139mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cic03032]
    CICLE_v10009139mg
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10009139mg
DNA replication proteins [BR:cic03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    CICLE_v10009139mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     CICLE_v10009139mg
   MMR (mismatch excision repair)
     CICLE_v10009139mg
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     CICLE_v10009139mg
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon RMI2 TrmB HTH_24 HTH_5 tRNA_anti_2 DDRGK MarR_2 Rrf2 B-block_TFIIIC
Other DBs
NCBI-GeneID: 18053943
NCBI-ProteinID: XP_006450138
UniProt: V4TS61
Position
Unknown
AA seq 280 aa
MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK
SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD
GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP
QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVN
ELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFARG
NT seq 843 nt   +upstreamnt  +downstreamnt
atgttttcgagtagccaattcgacgccagcaatgcattttccggcggcggattcatgcct
tctcagccgcctcagtccgccgattatccttcttctacggcaagaagtcgtgattctcaa
gggttagtaccagtgacagtgaagatgataagtgaagcttcccactctggtgatgataaa
tcgaattttatgatcaatggtttggagattactaatgttacattggttgggctggtgtat
aacaaagaagaaagagcttctgatgttaatttcactctagacgatggaaccgggagagtt
gtatgtaaaagatgggcaagtgaggtttttgacaccagggaaatggaggccatacaagat
ggaatgtacgtacgtctcattgggaacttgaaaagctttcaagggaaaaaacagattgtt
gccttctctgtgaggccagtgacaaactttgatgaggttacttgccactatattgaatgc
atatactttcacttgcaaaattccaagtcacaggtacaaggttttccttcatctcagcct
cagatggtcgattcatcactgaacacttctgcccgaaccggtttaagtggatatcagaca
gccccaactaatctctcttcacaatttggcgttgacggactgaaggattgtgaccaaatg
atccttgactatctgcagcaaccatccagcagtgaacgggaaaggggagtacacgtaaat
gaactttctgagcagctgaaaataccccaaaagaagatcatggattcaattgcatctctt
gaaaatgaaggcttgatctactccactattgatgagtttcactacaagttcgccagaggt
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (26)   

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