KEGG   Citrus x clementina (clementine): CICLE_v10014999mg
Entry
CICLE_v10014999mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CICLE_v10014999mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v10014999mg
Enzymes [BR:cic01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     CICLE_v10014999mg
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     CICLE_v10014999mg
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 18051666
NCBI-ProteinID: XP_006447983
UniProt: V4TL95
Position
Unknown
AA seq 497 aa
MGMPSYSFTCQTSYLTAMAKEGFDFNTCIYDGISYLSEAQESAAKVRMGNPMAVDHATKS
SSSPALSVADTVFIERVRSRVKHWKNACTDSDIKTEALVTSLRKIVLGGEQFGSRPSMTI
DVCSERQVQLVLKMLEDFSDVLVPLIIPAKGGGTQAVRAVLTSSDEDKDLLKRELQTFGF
EQNKRVRGFREVIDLISASQKPLVAHNSLNDFTFIHSKFLAPLPPNMNEFICSLRLAYPQ
VIDVNYLLKDIGPVKKMTNISATIAYLKNRFFAPIEMEIPNQANENEGKIHGHNVVKICQ
LFGKLCSILKITPDAIESSDDFLASAINRYTNIFYSLPGSSQEPTNEEIRGWTNDKRKVS
CEDVVFLWGFRERISAGILKNMLQGSHEVFAEAFNVRMVDRSCAIVVFGKPGLSNTFKNV
MNSKAVSGPLREMVSDGLKAAGYETYQRVCSSGLWESALADALDKTLASHNCLSEAAYET
KQSEIYLSNELINLAEL
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggggatgccatcttacagttttacttgtcaaacatcatatttgactgcaatggcgaaa
gagggttttgattttaatacctgcatatacgatggcatatcatacttatctgaagcacaa
gagtccgctgcaaaagttcgaatgggtaatccaatggctgttgatcatgcgacaaaatct
tcctcttcgcctgctcttagcgttgctgatacagttttcattgaaagggttagatcacgt
gttaagcattggaaaaatgcgtgtacagactctgacataaagacagaggctctggtgaca
tccttgagaaaaattgttttaggaggggaacagtttggatctagacctagcatgactata
gatgtttgcagtgaacgtcaagttcagctagtactaaagatgttggaagacttttctgat
gtccttgttcctctaataattccagcaaagggtggaggaacacaggcagttcgagctgtg
ttgacaagttcagatgaggacaaggatcttttaaagagggagcttcaaactttcggattt
gaacaaaataagagagtccgtggatttcgagaggtgatcgatttgatctctgcttcacag
aaacctcttgtcgcccacaattcccttaatgattttacatttatccattcgaaatttcta
gctcccctacctcctaacatgaacgagttcatctgttctttgcgcttggcttaccctcaa
gtaattgatgtcaactatctgttgaaggatattggtcctgtgaaaaaaatgaccaatata
tctgctaccatcgcctacttgaaaaataggttctttgcacccattgagatggaaattcca
aatcaagctaatgaaaatgaaggcaagattcatgggcataatgtcgtgaaaatatgccag
ttgtttgggaagctgtgctccatattgaaaatcactcctgatgctattgaatctagtgat
gattttctggcatcagccattaaccgctacacaaatatcttctacagtttgcctggcagc
tctcaagagccaactaatgaagagatcagaggatggaccaatgacaaaagaaaagtaagt
tgcgaggatgtggttttcttgtggggatttagggagaggatatctgctggaattctgaag
aacatgctgcaaggctcccatgaagtttttgcagaagcattcaatgttcgcatggtggat
aggagctgtgccatcgtggtttttgggaaaccggggttgtccaacacttttaagaatgtg
atgaacagcaaagcggtttctgggcctttgcgagaaatggtatcagatggcctaaaagca
gcaggttatgagacctaccaaagagtttgcagctcaggtttgtgggaatcagcgttagca
gatgccttggacaaaaccttggcaagccataattgtctttcagaagctgcttatgagaca
aaacaatcagaaatttatttatccaacgagttgattaacttggctgaactctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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