KEGG   Citrus x clementina (clementine): CICLE_v10030725mg
Entry
CICLE_v10030725mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K14318  nuclear pore complex protein Nup88
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CICLE_v10030725mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v10030725mg
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CICLE_v10030725mg
SSDB
Motif
Pfam: Nup88 Cluap1 Ezh2_MCSS Occludin_ELL
Other DBs
NCBI-GeneID: 18043620
NCBI-ProteinID: XP_006435724
UniProt: V4V9S1
Position
Unknown
AA seq 808 aa
MRFNFDLSEQSTDSRLSLTPKEEVEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDG
ASRLYYWDQNAQCLHRISVRLGEPEPTSILAASPSKVMRADVKLNFEVSRISINRNGSAL
LLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLG
ILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFV
LFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFP
EVAQETIDEGDLPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFL
YNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISG
ELPVVKLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHD
GGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSW
IVGVTSTQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKEIDTPDIISKELLSGPKVILL
PQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKVHFELKHHAPQLKRIIDDQHAR
LSEAQNKVLKVEERQSRLEERIDHAVQQHNSLEQRLQHLRNLPGAHKKPLSGAEHALKAE
LDHFEGVELDALHSSIEALRARLRRLTQSPEGSPGNQQRQTLGKNYVQDAQISQLRSLME
KLSLVNSENLKKVKLVESALKKQESSRY
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgcgtttcaatttcgacttgtcggagcagagcacagactcacgcctatccctcacgccg
aaagaagaagtcgagtgggtcccgcttcaaaagcacccagtgttctccgcccccgacgca
gttagaaacggcggcggaaaatttaacggagctccaaagaatctagtggcctgggacgga
gcctcacggttgtattactgggaccagaacgcacaatgcctccatcgaatctccgttcgg
ttgggcgaacccgaaccgacttccatcctcgccgcttctccctccaaggtgatgcgagct
gatgtgaagctgaattttgaagttagtagaatctcgatcaatagaaacggatcagctttg
ttacttattggctcagatggtctctgtgtaatgtacttgtacggacgtacttgtagtagt
gataacaaaaccatcatttgcaggactgtttcagtcggttcccaaatatattttagtagc
agcaatgtgatacggacactacaagtttcgtggcatccttatagtgatacccatctgggg
attctttcttctgattcagttttcagacttttcaacctggcttcagatgtaatgcaacca
gagcaagaatattatctgcagccagttgaaccaggtcgatataggaatgctgcttcaatt
tgccctgttgatttttcttttgggggagaccacttgtgggacagattcagtgtttttgta
ctattcagtgatggttcaatttacatcctatgtccagtagtcccatttggaagtgtttac
aaatgggaatcgatattggagatatataatgatgctcaaacatttggtttgagatcagtc
aattcattggctgtcagaaattctagtcttgcaatctcttggctggaagcaacatttcct
gaggtggctcaagaaacaattgatgaaggagatctacctgcactaaaagctcatccgcat
gctttgtttgattcatcagtttctttgcaggggcctctaagaaagatatgtcatggtggg
gaagatgaatctctagctgttcgaggtgcagaatgtgaaggtcgtgcagtcagctttctc
tataatttggtcagcaaagactcaattgtggtgacttcatggagtggtgggcaattgcag
atagatgctctagctgatgaaatccagccagtctggacagttaatatcccgcctcgtctt
cgtgttgattcccaggatcgtattcatggtcttgctatgatctgtgaaccaatctcaggt
gagcttccagttgtgaagcttgatcaaccacttgatcatactgtttggttgggacatcca
cctcccttgttgagactggctaccgtggacttggccttgcccaaaaacacagaaagtggt
tctattattaccatgtctattgatcccctaatgcaagaaagaatatatattgtccatgat
ggagggatcgattcagtagtgttgcattttctcccgtttacaagtcaaaccaggggtaag
gatgaaactaacagaagtccctctgtgcatcccgtcctaaatacatgccagggagaaacc
tcctcaccatctcccttgtgtgggtttgtatcattatcggattcatttgggtactcatgg
atagtgggagtcacctccactcaagagtgtgttgtgatagagatgaagacttggaaccta
ttgcttcctgttcaaattgattcagagaaaaaatctgttgatttgggagcaaagaaagag
atagatactcctgatatcataagcaaagaactgttaagtggtccaaaggtgattcttctt
cctcaggcttcaccgaatctacgttctgttgctgctgattctattgaaggtcgatcaact
cttcatcagtatttcaatcttttccaagagaattatgttgagtatgcacataaggtacac
tttgagctcaagcatcatgctccacaactgaagcgaatcattgatgatcaacatgctcgt
ttatctgaggcacaaaataaggttttgaaagttgaggagagacaatcgagattggaggag
aggatcgatcatgcagttcagcagcataacagtttggaacaacgattacaacacttgcgg
aatttgcctggggcacacaagaaacctttgtctggagctgagcatgcattgaaggctgag
cttgaccactttgaaggagttgagttggatgctttgcattcttccattgaagcattaaga
gcgaggctaagaaggttgacgcaatctccagaaggcagtcctgggaaccaacaaaggcaa
acattagggaagaactatgtccaagatgcccaaatatcgcagctcagatccttaatggaa
aagctctcacttgtaaatagcgagaacttgaagaaggttaagcttgttgaatctgcatta
aaaaagcaagaaagcagcagatactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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