KEGG   Coccidioides immitis: CIMG_01039
Entry
CIMG_01039        CDS       T01114                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
cim  Coccidioides immitis
Pathway
cim03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CIMG_01039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cim03041]
    CIMG_01039
   03032 DNA replication proteins [BR:cim03032]
    CIMG_01039
Spliceosome [BR:cim03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CIMG_01039
  U2 snRNP components
    CIMG_01039
 Complex B
  U1 snRNP components
    CIMG_01039
  U4/U6.U5 tri-snRNP components
    CIMG_01039
 Complex C
  U2 snRNP components
    CIMG_01039
DNA replication proteins [BR:cim03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CIMG_01039
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 4567885
NCBI-ProteinID: XP_001247268
UniProt: J3KIA6
AA seq 120 aa
MKLVRFLMKCANETVTIELKNGTILHGTIASVSPQMNTALRTVKMTPKGREPISLDTINI
RGSTIRYFILPDSLPLDTLLIDDTPKPKNKAKKETDRGRGRGGPRGRGGRGRGRGRGRGF
NT seq 363 nt   +upstreamnt  +downstreamnt
atgaagcttgtccgatttcttatgaaatgcgccaatgaaacggtcacaatcgaactaaag
aatggcacaatactacatggaacgattgcgtctgtttctccacaaatgaacactgccctc
cgcacggtaaagatgacgcccaaaggccgcgagccgatatccctcgacacaatcaacatc
cgcggttctacgattcgatatttcattcttccagatagtctaccgttggataccctcctt
atagatgatactccgaaacccaagaataaagcgaagaaagaaacggatcgtggacgtgga
cgaggcggtccgagaggtaggggtggcagagggagagggcgcggcaggggtcgtggtttc
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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