KEGG   Coccidioides immitis: CIMG_05636
Entry
CIMG_05636        CDS       T01114                                 
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
cim  Coccidioides immitis
Pathway
cim03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CIMG_05636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cim03021]
    CIMG_05636
Enzymes [BR:cim01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CIMG_05636
Transcription machinery [BR:cim03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     CIMG_05636
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 4562920
NCBI-ProteinID: XP_001246195
UniProt: J3KG03
AA seq 1444 aa
MQAVEGVPIDPGKAQVVDRVPKVIKEIKFGVLASQDIVSQALVEVSDRKLFDLDNDRAVA
RHGPLDGRMGISSKSGTCETCGGALQECNGHFGHVRLVLPAFHVGYFKRVIGILQEICKD
CSRILLPENERRIFLKEMRRQGIDNLRRMQINKRINDRCRKTRTCYVCHAVNGVVKKAGT
SALKITHDKFRAFNASTSAKKVPPPSKLVFDRSFEEAKRSNTDIEKHFKKVQDDLNPLRV
LKLFRRISDEDCELLGLNPEEVRPEMFLWQYIPAPPVSIRPSVGQEGASTEDDLTAKLGD
IVQSNINLKNAINKGAPVQTIIECWDYMQLQIAVYINSDVPGLQKADFGKPIRGICQRLK
GKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPQLVAMNMTYPERVTRYNKEKLRE
RVRNGTKIWPGANYLSKRGTTFKVFLKYGNLNLMADQLEEGDVVERHLEDGDIVLFNRQP
SLHKLSILSHFVKVRPHRTFRLNECVCNPYNADFDGDEMNLHVPQTEEARAEAMELMGVK
NNLATPKNGEPIIAAIQDFITAAYLLSSKDNFYDRGSFTQTCGYMLQPGTKFDLPPPAVL
KPQMLWTGKQVFNVLMRPSKESPVLVNLDAACREFRAPKGTPRDLDPNDGWLCIRNSEIM
CGVMDKSTIGSGKKDSVFYVMLRDFGPQVAAEAMNRLSRLSARWFTNIGFSIGITDVYPG
DSLLQAKKQLVEEAYAQCDALIQLFKAGKLEKAPGGDEQQNMESQISGILSKVRQQAGEQ
CIAELSKWNSPLIMATSGSKGSTINVAQMIALVGQQIIAGQRVQDGFQDRTLPHFPKYAR
QPPAKGFVRNSFFSGLIPSEFFFHAISGREGLIDTAVKTAETGYMSRRLMKSLEDLSSRY
DDTVRNSSSNIVQFQYGDDKLDPVDMEGKAKPVHFDRTFTHAETTTYSKEDRGLLPSEVI
DLCRQMLAPERAKLDRFDLLGNSLEYTDRSDHGIDQLESNRDFLQSIEDYIQAKADRLHS
VTGTEADTLEGQMALSHTVKLSAKTLTTFITSCLTKYKKAQVEPGHAVGAVGAQSIGEPG
TQMTLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPIITCELVNKEDVRAAQIVKGRV
EKTFIKDIIYYIEEAWTSSVAYINIKIDFSTIQALQLELTLRDILNAIKKHKRFRSDDLK
FRSFGSHIHIFVDQATTKTSLTKAEQAATGSDPYIRLKHLKRLLPTIQVLGHPQCSRAII
RTDETNTTNTLLVEGYGLRACMTTDGIFGTRTRTNNIMETKDVLGIEAARTTIVDEISDV
MKDMGIDPRHMQLLADVMTYKGEVLGITRFGLAKMRDSVLQLASFEKTADHLFDAGGAGR
TDLVEGVSECIILGKSVSLGTGAMEMVRAMNFYEGQIGKKKSVFEDVWKDIIEAPAKARR
KKKV
NT seq 4335 nt   +upstreamnt  +downstreamnt
atgcaagctgtggagggtgtgccaatagaccctggcaaagcccaggtcgtcgatagggtt
cccaaagttattaaggaaatcaaattcggcgttctagcgagtcaagatatcgtaagccag
gctctcgtcgaagtctccgacagaaaactttttgaccttgataatgatcgtgctgttgct
cgtcatggcccgctggatgggcgcatgggcatatcgagtaaatccggcacttgtgagacc
tgcggaggcgctttgcaggagtgcaacggccatttcggtcatgtccgactcgttctaccg
gctttccacgtaggatacttcaagcgagtcatcggcatactacaggagatttgcaaggat
tgctcacgaatcctgttgcctgaaaatgagaggcgtatatttctgaaagagatgaggaga
cagggaatcgataatctacggcgcatgcaaatcaacaagcggattaatgaccggtgccgg
aagactcgaacgtgctatgtctgccatgccgtcaatggtgtcgttaaaaaggcgggaacg
agcgccctgaaaatcacacatgataagtttcgtgctttcaacgcttctacttctgccaaa
aaggtaccgcctccgagcaagctggtgttcgaccggtcctttgaagaggccaaacgctcg
aacacggatatcgagaaacactttaaaaaggtgcaggatgatcttaatcccctccgggtg
ttgaaactattccgccgtatctcggatgaagactgcgagttactcggcttgaacccggag
gaggtgcggccggaaatgttcctttggcaatatattcctgctccaccggtgtccattcgt
ccgtcagtgggccaagagggtgcaagtaccgaagatgacctgactgcgaaactcggggac
atcgttcagagcaatatcaatctgaagaatgccataaataagggtgcacctgtacaaact
attattgaatgctgggattatatgcagcttcaaattgcggtttatattaacagtgatgtg
cccggtctacagaaggcggactttggaaagcctatcagaggcatctgccagcgtctgaag
ggaaagcagggcagatttagaggcaatctctcagggaaacgtgttgatttctccggcaga
acggtcatttctcccgatccgaatttaagaattgatgaagttgctgtaccgcagcttgtc
gcgatgaacatgacatatcccgagagagtgacaagatacaataaagaaaagctccgcgaa
cgagttcggaacgggacgaagatctggcctggagcaaactacctgtccaaaagaggcacg
actttcaaggtcttcttgaagtatggcaaccttaacctcatggcagatcagttagaagag
ggcgatgttgttgaacggcatttggaggatggcgatatcgtactgtttaatcgacaaccc
tcactccacaaactcagtattctttctcactttgtcaaagtgcgaccacacagaacattc
cgtctgaacgagtgtgtttgcaatccttataatgccgattttgatggggatgaaatgaac
ttgcatgttccccagacggaggaggccagagctgaggcaatggaactgatgggggttaag
aacaatttagctacacccaagaacggagagcctatcatcgccgccatccaagatttcatc
accgctgcatacttgctgagtagcaaagataatttttatgatcggggatcgttcactcag
acctgtggctacatgctgcaaccgggtaccaaattcgatcttcctccgccagcagtgcta
aaaccgcaaatgttatggaccggaaagcaggtgtttaatgtgctgatgcgtccgagtaaa
gagtctcctgttcttgtcaacctagacgctgcatgcagagaattcagagcacccaaaggg
accccaagagatcttgatcccaacgacggttggctatgtattcgaaattccgaaataatg
tgtggtgtcatggacaaatcgactatcggatctggtaaaaaggattcagtgttttatgtc
atgcttcgtgactttggaccgcaagtagccgcagaggctatgaatcgactctcaagactc
tccgctcggtggtttacaaacattgggttctccatcggtattacggacgtttatccgggc
gattcactgcttcaggcaaagaagcagctcgttgaagaagcttatgcgcagtgtgacgcg
ctgattcagttattcaaagccggcaagctcgaaaaggctcccgggggtgatgaacagcag
aacatggagagccagatctctggtattctcagtaaagttcgtcaacaagctggtgaacag
tgtatcgcggaattaagcaaatggaactctcctctcatcatggctacgtctgggtcgaag
ggttctactatcaacgttgcgcaaatgattgccctcgtgggtcagcaaattattgcaggg
caacgtgtacaagacggcttccaggatcgaaccctgccgcattttcccaagtacgctcgt
cagccacctgcaaagggcttcgttcgaaacagtttcttctccgggttaataccatctgaa
ttcttctttcacgcaatctcaggacgcgaaggtctgattgatactgcggtcaagactgca
gaaacgggttacatgtcccgtcgactcatgaagtcgcttgaggatttgtcgagccgttac
gatgacaccgtaagaaattcctcatcgaacatcgttcagtttcaatacggtgatgataaa
cttgatccggttgacatggaaggtaaagcgaaaccggtccactttgaccggacgtttacg
cacgcagaaactaccacgtacagcaaagaagatcgaggtttacttccgtcggaggttata
gacctctgtcgccaaatgcttgctcctgaacgtgccaagcttgaccgttttgatttactc
ggcaatagtctcgaatatactgaccgcagtgatcatggcattgatcaactcgaaagtaac
cgcgacttcttgcagtctattgaagattacatccaagccaaggctgataggcttcattct
gtaaccggaactgaagcagacacgcttgaaggacagatggcgttatcacacacggtgaag
ctctccgcaaagacgttaactacttttatcacgtcgtgcctcaccaaatataagaaggcc
caggttgaacccggccacgctgtgggtgctgtcggcgcacagtccattggtgaacccggc
acccaaatgactttgaagactttccattttgcgggtgttgctggcatgagtataacacaa
ggtgttccccgtatcaaggaaatcatcaacgcttcaaaggagatcagtacgccgatcatc
acttgtgagcttgtcaataaggaagacgtgagagctgctcaaattgtcaaaggccgtgtc
gaaaagaccttcatcaaagacattatatactacatagaagaagcatggacgagttcggtc
gcatacatcaacatcaaaatcgacttctccaccatccaagctctccagctagaacttaca
cttcgtgacatcctcaacgcgatcaagaagcataaacgcttcagatccgatgatttgaaa
ttccgctccttcggatcgcacattcacatctttgtagaccaagccacgaccaaaacctca
ctcaccaaagccgaacaagccgccaccggttcagatccttatatccgcctcaaacacctg
aaacgcctgctgcctacaatccaagttcttggtcaccctcaatgctcgcgtgcgattatc
cgtacggacgaaaccaacaccactaacaccttacttgttgaaggttacggtctccgtgcc
tgcatgactaccgacggtattttcggtacccgcacgcgaaccaataatattatggaaacc
aaggacgttttaggaatcgaagcggcgcgcaccactattgttgatgaaatcagcgatgtg
atgaaggacatgggcatagatccgcgtcacatgcagctgctcgccgatgtgatgacttac
aaaggtgaagttttaggaatcacacgtttcggactggctaaaatgcgagactctgttcta
caattggcaagttttgagaaaactgctgatcatctctttgatgctggtggtgcgggtagg
accgatctggtcgagggtgtgtcggagtgcattatactgggaaaaagtgtatcattagga
acaggagcgatggagatggttagggcgatgaatttctatgaaggccagattgggaagaaa
aaatctgtctttgaagatgtctggaaagacattatcgaagcaccagcaaaggcgaggagg
aagaaaaaggtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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