KEGG T01056: 100170057

Ciona intestinalis (sea squirt): 100170057

Entry

100170057 CDS T01056

Gene name

zf(cchc)-24, Ci-ZF(CCHC)-24

Definition

zinc finger (CCHC)-24

Orthology

K12896

splicing factor, arginine/serine-rich 7

Organism

cin Ciona intestinalis (sea squirt)

Pathway

cin03040

Spliceosome

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:cin03040]

SSDB

Motif

Pfam:

RRM_1 RRM_6 RRM_5 zf-CCHC zf-CCHC_3

Other DBs

NCBI-GI:

198422993

NCBI-GeneID:

100170057

UniProt:

H2Y1W9

Position

AA seq 230 aa
MARDTKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKG
LDGKELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSDRCYNCGET
GHYAYDCDLYNRRRGGGGGRSDRRRRSYSRSRSHSPRRRGRRSRSYSRSRSRSRRRSYSR
SRSKSYSRSRSLSADRRSRSKTPKKSRKDSVGDDEIRNGEKSVSRSRSRS

NT seq 693 nt +upstreamnt +downstreamnt
atggcgagagatacaaaaatttatgtcggaaatctgtcatcttcgaccactagaggagat
cttgagtatgagtttgaatattatggcaggcttataaatgtgtgggttgcgaaaagtcca
cccgggtttgcttacgttgaatttgaggatccaagagatgctgatgatgcaataaaagga
ttagatggaaaagaattacacggtcggcgaattcgggtcgagcgatctcatggaatgcca
aggaaccgaggatctgacagggatcgtccatcgtttggaggtggacgcgggggagatggg
ggaggaggatcacgaagagcatttcatccgtcggatcgctgttacaactgtggggagact
ggtcattatgcttatgactgtgatctctataatagaagacgtggtggcgggggaggtcgc
agcgatcgtcgacgccggtcttattcaaggtcccggtcgcactcaccacgccgtagagga
agacggtcacgtagttattctcggtcacgaagcaggtcacgcagacgtagttattctagg
tcaagatccaagagttattcccgctcacgatctctatctgccgatcgaagatcaagaagt
aaaactccaaagaagagtcggaaggatagtgttggagatgacgagattagaaatggtgaa
aaaagtgtctctaggtccagatcacgctcatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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