KEGG   Ciona intestinalis (sea squirt): 100175354Help
Entry
100175354         CDS       T01056                                 

Gene name
whsc1
Definition
histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific-like
Orthology
K11424  
histone-lysine N-methyltransferase NSD2 [EC:2.1.1.43]
Organism
cin  Ciona intestinalis (sea squirt)
Pathway
Lysine degradation
Brite
KEGG Orthology (KO) [BR:cin00001]
 Metabolism
  Amino acid metabolism
   00310 Lysine degradation
    100175354 (whsc1)
Enzymes [BR:cin01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     100175354 (whsc1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
12
AA seq 754 aa AA seqDB search
MACIRCPTAFHIGDDCIAAGSILLPGLNIICPDHFEPLKTTPHHQPVHVSWCFVCSKGGQ
LMCCETCPAAFHPLCVGFPQTPEGEWFCRDCRYKKRPLYGEIVWVKLGSYRWWPGEITHP
NEIPDNIQRLHHGIGEFVVRFFGSNDYFWLNKRRVFAYQEGDTGATSTNCSRGISSVFNK
ALQEAQESFEELMSYRQKLQDVKTQKKRPMYKHIKTNKPVGGVQIYTAELSEIARCICKK
TDPNPCGPESECLNRMLMYECHSDLCPAGEKCQNQRFQKREYPSSEVFKTSWGGWALRAK
DLIKKGEFVSEYVGELVDSEECMRRIEDAHKNNVTNFYMLTIDKDRIIDAGPKGNYSRFM
NHSCDPNCETQKWMVNGDTRVGLFALREIQDGEELMFNYNLDCLGNDKTPCMCGSANCSG
FIGVRPKPQMGENGNNGKSVKRKRRRQESKNVPKHDDFCFRCRQVGTLVCCDVRACQRAF
CLRCLRLTKSPFGKWQCPWHHCDFCGRRAQNFCHFCPNSFCSSHVANQLLPSVPNKYDCC
TDHDPNVAEYEMEEAIAAICASMLGPDGSSEIHDEDLESPSSAPEQEVLPDPKNVQMPSP
KKAPVAPVPTLGVSTPPPRKRGRPRKNKTIETPVPKIPEPVTQEETLLSDAITESDDPEE
EDDDEYLGPPTSSPYKMKRVKRSFYTGRKKKRRKSNAESAQSKNAKSSPGKNAKSSPLKN
LQTIPQNNVESSPQNNAVSPTLNNDSPVKMDMRE
NT seq 2265 nt NT seq  +upstreamnt  +downstreamnt
atggcatgcatccggtgtccgactgcgtttcatattggtgatgactgcatagctgctggc
tctattttgttacctggtttaaatataatttgtcccgaccattttgagccattaaaaaca
acccctcaccatcaacctgtgcatgttagctggtgttttgtttgctcaaaagggggtcaa
ctaatgtgttgcgagacttgccccgctgcctttcaccccctttgtgtgggatttccccaa
accccggagggtgaatggttctgtcgggattgtcgatataagaagagaccgctatatggg
gagatagtctgggtgaaactgggttcttacaggtggtggccaggtgagatcacgcatccc
aatgagattcccgacaacatccagcgcttgcatcacgggatcggagagtttgtcgttcga
ttctttggatcaaacgattacttttggctaaataagaggagagtcttcgcttaccaggaa
ggggatactggagcaacatcaacgaattgttcgaggggaatcagcagcgtatttaataaa
gccctccaggaggcgcaagagagctttgaagagttaatgtcatatcggcagaaattacaa
gatgttaaaacccagaagaaaaggccaatgtacaagcatattaagaccaacaaaccagtg
ggtggggttcagatatacactgccgagctgagcgagattgctcgttgcatttgtaagaaa
actgatccgaatccatgcggacctgaatctgagtgtttgaacagaatgttgatgtatgag
tgccactctgacctctgccctgctggtgaaaaatgtcagaaccaaagatttcagaaacgt
gaatatccttcttctgaggtgtttaaaacttcttggggtgggtgggcactgagggcaaaa
gatttgatcaaaaagggtgaattcgtgagcgaatacgttggtgaattagtagatagcgag
gaatgcatgcgaagaatagaagacgctcataagaataacgtcacaaacttctacatgctt
actattgacaaagatcggattattgacgccggtccaaagggcaattattcacggttcatg
aaccattcatgtgatccaaattgtgagacgcagaagtggatggtgaacggagacaccagg
gttggattgttcgcattgagggagatacaggatggtgaagaactgatgtttaattacaac
ctggactgtctcggcaacgataaaacaccttgcatgtgtggatcagccaactgtagtgga
ttcatcggtgtaagacctaagccacaaatgggtgaaaacggcaacaatggaaaatcagtg
aagcggaaacgtcgtcgtcaggagtcgaaaaatgttccgaaacacgacgatttttgtttc
cgttgccgacaagttggcactctggtttgttgcgacgttcgagcgtgtcaacgggctttc
tgtcttcggtgtcttcgacttaccaagtcaccatttggtaaatggcagtgcccttggcac
cactgtgatttttgcggccgtcgtgcccaaaacttctgtcatttctgtccgaactcgttc
tgttcgtcccacgtggcgaatcaacttttgcccagcgtccctaacaaatatgattgttgt
acggaccacgatccgaatgtagctgagtacgagatggaagaagcaatcgccgcaatttgc
gcttcaatgcttggccctgatggttcgtctgagattcatgatgaggatttggagagtcct
tcttctgctccagagcaagaagttctccctgatccaaagaacgtccagatgccgtctcca
aaaaaagccccagtcgctcctgttccaacactaggtgtcagcacaccacctccaagaaaa
cgaggccgaccaaggaaaaataaaaccattgaaacacccgttccaaaaattccagaacct
gtaacacaagaggaaaccctactcagtgatgccataacagaatctgatgatcctgaagaa
gaggatgatgatgaatacctcggtcctccaacctcctccccttataaaatgaagagagta
aagcgatctttttacacaggaagaaagaaaaaaagacggaaatcaaacgctgagtcagcg
caatcaaaaaatgcaaaatcatcgccgggaaaaaatgccaagtcatcgccgctaaaaaac
ttacagacaataccacaaaataatgtggagtcatcgccccaaaataatgctgtgtcacct
acactgaataatgattcacctgttaaaatggatatgagggagtaa

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