KEGG   Ciona intestinalis (yellow sea squirt): 100176506
Entry
100176506         CDS       T01056                                 
Name
(RefSeq) vesicle-trafficking protein SEC22b
  KO
K08517  vesicle transport protein SEC22
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04130  SNARE interactions in vesicular transport
cin04145  Phagosome
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    100176506
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100176506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100176506
Membrane trafficking [BR:cin04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Sec22
    100176506
SSDB
Motif
Pfam: Longin Synaptobrevin DUF3755
Other DBs
NCBI-GeneID: 100176506
NCBI-ProteinID: XP_002129330
Position
13:1060199..1063434
AA seq 215 aa
MVLMTMIARVGDGLALAASMQEDEQTGKSLTEYQNQAKMLFRKLNNQSPDRCTIESGRML
FHYMIDQSICYLVLCEPSFSKKLAFSYLEELSSEFFVQYGNRVNSVTRPYAFIEFDTYIQ
KTKKAYMDSRTRRNLSVVSSELQEVQKIMVSNIDDVLQRGVALSDLGDKASNLATMSKKY
KQDAHYLNLRSSYAKIAAVVILLLIFIIYIRYWWL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggttttaatgacaatgatagccagagtaggggatgggctagccctggcagcctccatg
caggaagatgaacagaccggcaagagcctcactgaataccaaaaccaagcaaaaatgctg
ttccgtaagttgaacaaccaaagtcctgacagatgtacaattgaatctggaaggatgtta
tttcactacatgattgaccagagcatttgttaccttgtgctttgtgaaccaagttttagt
aaaaaacttgccttttcttacttagaagaattatcatccgaattctttgtacaatatggg
aacagagttaactcagtaacaaggccatatgcatttattgagtttgacacatatatacag
aagactaaaaaggcgtatatggatagcaggacacgcaggaatttaagtgttgtctcatca
gaactacaagaagttcaaaagattatggtttcgaatattgatgatgttttgcaaagagga
gttgctttgtcagatctaggagacaaggcaagcaacttagctacaatgtcaaagaaatat
aagcaagatgctcactaccttaacctgaggtcttcatatgctaagattgcagccgttgtc
atcttactacttattttcattatatatatacgatactggtggctatga

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