KEGG   Ciona intestinalis (yellow sea squirt): 100176911
Entry
100176911         CDS       T01056                                 
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
  KO
K12736  peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    100176911
   03110 Chaperones and folding catalysts [BR:cin03110]
    100176911
Enzymes [BR:cin01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     100176911
Spliceosome [BR:cin03041]
 Complex C
  Other components
   PPlases
    100176911
Chaperones and folding catalysts [BR:cin03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    100176911
SSDB
Motif
Pfam: Pro_isomerase WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 100176911
NCBI-ProteinID: XP_026691481
Ensembl: ENSCING00000006906 ENSCING00000021332
Position
8:complement(5563240..5569733)
AA seq 618 aa
MADEEKGTKRSLDNDDDEEEWVGPMPQEAAKPKKIKVLPYEQTYLDNMPSSDRYERSYMH
RDNITHVAVTKTDFVLTASCDGHVKFWKKQERGIEFVKHFRAHLGAITCMSVSYNGELMC
TVSQDKAMKVFDVINFDMINMIKLGYTPSVSEWVFSSGSRIFTVAVAKFGEGSIFIYDGR
GGASPLHEVKVHQQEVTCIKYNPTFKTAISADKQGMLEYWSGQEDDYTFPKSVVKFEFKT
DTDLYELARLKCHAQSISVAPDGSTFAVITSNRRVIVFKFLTGKKSRVYDESLNTFIELQ
RSKAQLANMEFGRRVAVERELLKNESSLSCNNVVYDDTGKFILYATMLGIKIINLHTNKC
CRMIGKMENIRLLNISMFQGSVSKMKATITADMKASDNPALQGTVSDPTIFATAYSKNRF
YIFSRITPDESSTKGTDRDVFNERPSKDEVLAATQTQTEKRIFSNATIHTSMGDIVLKLF
SNECPKTVENFCVHSRDGYYNGHIFHRVIKGFMLQTGDPKGTGTGGESIWGGEFEDEFHP
SLRHDRPYTLSMANAGPNTNGSQFFITVVPTPWLDNKHTVFGRVSSGMEVVHNIAAAKVH
PKTDKPYDDISIINISVK
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggctgatgaagaaaaaggaacaaagcgttcccttgacaacgatgatgatgaagaggaa
tgggtcggtcccatgccacaagaagctgcaaaaccaaagaaaattaaagtgttgccatat
gaacaaacttatctggacaacatgcccagctctgatagatatgagcgtagttacatgcat
agagacaatataactcacgtggctgtcactaaaactgacttcgtgttgactgcaagttgc
gacgggcacgtcaagttttggaagaaacaagaacgaggaattgagtttgtgaaacacttc
agggcccaccttggagcaatcacttgtatgtcagtaagctacaacggtgaacttatgtgc
acggtatctcaggacaaagctatgaaggtgtttgatgttattaactttgatatgatcaac
atgattaaactggggtacacacccagtgtcagcgaatgggttttctcatcgggtagccga
atatttacagtagctgtagctaagtttggtgaaggaagtatctttatatatgatgggaga
ggaggggcttcccccttacatgaggtcaaagttcaccaacaggaagtgacctgcataaaa
tacaacccgacctttaaaactgccatatctgctgataagcaagggatgctggagtactgg
tcagggcaggaagatgattacacttttccaaaatccgttgtgaaatttgaatttaaaact
gacaccgacctttacgagttggctcgattaaaatgtcacgctcagtcgatttcggtcgct
cccgatggatcaacgttcgctgttatcacttcaaatcgccgagtcatcgtttttaaattt
ctcacaggaaaaaaatctcgagtttatgacgagtcattaaatacatttatcgaactgcaa
agatccaaagctcaacttgccaacatggagtttggtcgcagggtcgctgtcgagcgagag
ttgttgaagaatgaatcaagtttgtcgtgtaacaatgtggtttatgacgacacaggaaag
ttcattctttacgcaacaatgctgggaataaagataattaatctacatacaaacaaatgc
tgcagaatgatcgggaaaatggaaaatattcggttattgaatatttctatgttccaaggc
tcagtatcaaagatgaaagcgacaatcacggccgatatgaaagcctcggacaacccagcg
ctgcaaggaactgtatcggacccaactatatttgctaccgcttatagcaagaacaggttt
tatattttttcccgtattaccccggatgaatcatccaccaaaggaacggatcgcgacgtt
ttcaacgaacgaccaagcaaagatgaagttcttgcagcaacgcaaactcaaacagagaaa
agaatattttcaaatgccacaatacatacttctatgggtgacattgttttgaaactattt
tccaatgaatgtccgaagactgttgaaaacttctgtgttcattcacgagatggttattac
aacggacatatattccaccgtgttattaagggcttcatgttacaaactggagatcctaaa
ggaacaggaacaggaggagagagcatctggggaggagaattcgaagatgaatttcatcca
tctttacgtcatgaccgaccgtatacattaagtatggctaacgcgggtcccaacacaaat
gggtcccagttttttatcacagtagttcccactccgtggttggacaacaaacacacagta
tttggaagagttagtagtggaatggaggttgtgcataacattgctgctgctaaggttcat
cctaagactgataagccttatgacgatatttcgattattaacattagtgtaaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (89)   
   KEGG ORTHOLOGY (1)   
   RefGene (83)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (2)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (102)   

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