KEGG   Ciona intestinalis (yellow sea squirt): 100177076
Entry
100177076         CDS       T01056                                 
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1
  KO
K04531  amyloid beta A4 precursor protein-binding family A member 1
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100177076
Membrane trafficking [BR:cin04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    100177076
 Endocytosis
  Clathrin-mediated endocytosis
   LDLR adaptor proteins
    100177076
SSDB
Motif
Pfam: PID PDZ PDZ_6
Other DBs
NCBI-GeneID: 100177076
NCBI-ProteinID: XP_026694928
Position
Unknown
AA seq 716 aa
MEEPLADFTEKLGGVLINDNESVEVLNNNEEENLLNTTVDSENNIDEVETVAQDELNEDE
VSENEYLLETETSDVVYTDTSDVKSKLCSDPDEHDNLHGLARQYDSLNLSEAKLTKECFD
ETPDEIESVDNNVSINDEIYEKNENADILIQPEAKLVEQYSPMKTVQPVELTSLPTIIPF
NNIEQPEDSPWQLQQTVAKNPDYVQNSEPTVQHDSPAQESSDIWAKQEVNGHDERPMFEL
MPNVPVKRISYDCDSCAGVEDIEAAVQQAKIDSNHEPVADDPWVKMAPTKTTSISAPSTS
VQPTKSIESAVPRSESAHHIKEDAPTPTQTPHNPVLNVPGPCEAEDLIDGIIFTANYLGS
TQLHSEKNPGKTARMLQAQEAVNRIKAPEGESQPSVEVDLFVSIDRVKVLNADTQETMMD
HTLRSISYIADIGTLLVVMARRRLPKNDSEEPKLMREPKPSRAYKVICHVFTSGDARIMA
QAIGQAFSVAYQQFLTSNGIEPQTLTPAAFNELLDMQEMYHDDLVHYSRRENVKDVWIEK
TKGEALGVVVVESGWGSIVPTVILANLQHGGPAERSGKLSIGDQIMSVNSTSLVGLPLTT
CQSIIKGLKGQSLARLNIVSCPPVVTVLIKRPDLKYQLGFSVQDGIICSLMRGGIAERGG
VRVGHRIIEINGMSVVAIPHERIVHMLVSSVGEIQMKTMPAMMYRLLTGQEHPVYI
NT seq 2151 nt   +upstreamnt  +downstreamnt
atggaggaaccactcgctgatttcactgaaaagttaggtggggttttaattaacgacaac
gaaagtgtggaagttttgaacaacaatgaagaagagaatttattgaacacgactgtcgat
tcggaaaataatattgatgaagttgaaactgtggctcaggatgaattaaatgaagatgaa
gttagtgaaaatgagtatttgttggaaacagaaacttctgatgtagtttatacagacaca
agtgatgtgaaatcaaagttatgttcggatccagatgaacatgacaatttacatgggctg
gctaggcagtatgactctttaaatttatctgaagcgaaattgacaaaggaatgttttgat
gaaacaccagatgaaatagagtcggttgataataatgtttcaataaacgatgaaatatat
gaaaagaatgaaaacgcagatattttaattcaacccgaagcaaaattggttgaacaatat
tcgccgatgaaaactgtgcagcctgttgaacttacatcactacctactattattcctttt
aataatatcgaacaaccagaagacagtccatggcagctgcagcaaacagttgctaaaaat
ccagattatgttcaaaatagtgaaccaacagtgcaacatgattcgccagcccaagagtcg
agtgatatttgggcaaaacaggaggtgaatggacatgatgaacgccctatgtttgaattg
atgccaaatgtacctgtgaaaagaatatcttacgattgcgacagttgtgcgggagtagag
gacattgaagcagctgtgcaacaagcgaagattgattctaaccatgaacctgtagctgat
gacccatgggttaaaatggctcctactaaaaccacaagtatatcagcaccttctacttca
gtgcaaccaactaaaagtattgagtctgccgtcccaagatccgagtccgcccaccatata
aaggaagacgcacccacccccacacaaaccccccacaacccagtgcttaacgtgccaggc
ccatgtgaagcagaggatttgattgacgggataattttcactgcgaattatcttggttcg
actcaacttcactctgagaagaatcctggcaagacagcaaggatgttacaagcgcaagag
gccgtcaatcgcatcaaagctccggaaggtgaatcgcaaccaagtgttgaagttgatctg
tttgtttctattgaccgagtgaaagtattgaatgcagacacgcaagagacaatgatggac
cacactttgaggtcgatatcatatattgctgatatcggcactttgttggttgtcatggcg
agaagaagattaccgaaaaatgattccgaggagccgaagttaatgagggaaccaaagccc
agtcgtgcttataaagttatctgccatgtatttacttcaggagatgcgagaatcatggca
caggctatcgggcaagcttttagcgtcgcttaccagcaatttttaacttctaacgggatt
gagccgcaaacattaactccggctgcgttcaatgagttgcttgatatgcaggaaatgtac
catgatgatctggtgcactactcgaggagggagaatgttaaagatgtttggattgaaaag
acaaaaggagaagcactgggtgttgtggtcgtggaatccgggtgggggtcgatcgtccca
actgtcattctcgctaatttacaacacggaggtccagcggaaaggtccggaaaactgagc
attggagatcaaataatgagcgtaaattcaaccagtcttgttggcttgccactaaccact
tgccaaagcatcattaaaggtttaaagggacaaagtcttgcaaggctgaacattgtatca
tgcccacctgttgtgactgtgctgattaagaggcctgacctcaagtaccaactcgggttc
tctgtacaggatgggattatatgcagtttgatgagaggtggaatagctgagaggggcggg
gtgagggttgggcatcgtattattgaaataaatggcatgagtgtggtggcaataccacat
gaacgtattgtgcatatgcttgtatcttcagtgggtgagatacaaatgaaaacaatgcca
gccatgatgtataggctgttgactgggcaagaacacccagtatatatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system