KEGG   Ciona intestinalis (sea squirt): 100179363Help
Entry
100179363         CDS       T01056                                 

Definition
ubiquitin carboxyl-terminal hydrolase 40
Orthology
K11869  
ubiquitin carboxyl-terminal hydrolase 40 [EC:3.4.19.12]
Organism
cin  Ciona intestinalis (sea squirt)
Brite
Enzymes [BR:cin01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100179363
Peptidases [BR:cin01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   100179363
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
2
AA seq 1351 aa AA seqDB search
MFGNLFEDGSNMACRNAKSVLSINGKPIEQPPEERGEQSLIGIQNQGATCYLNSLIQTLF
LTPEFREQLFDIGCEELGKSGPNKKDGKVRKIPLQLQLLFARLLLINQSSCKTEDLTDSF
GWRNSEEMQQHDVQELSRILFDAIENSLVGTSGDKLIHNLYKGVIVNQIQCCICQRVSER
DEEFLDLTVSVSGGKNLQSSLSSVFQAEEMMSGKNQYFCEKCKKLVNAKKGAKLKTLPPI
LTLSLLRFNYDLRTFNRYKETGHFPFPIKLNVEKYCKQHNVNGDGDGTDKDKPPCTEYSL
YSVIIHTGNAHRGHYHAYIRDVDGLEKAKLPIVDPEPDFEMSTTTSKAPTMVVVQKRSEP
VNPNDNIEETLACLIAQQGSVKLDQLSMKLRYETGISWNKKYRKKHGSLSKFLLSCPNTF
VVDNENNSVYLCSQPSEDSNQKLITNQLENINGSQQFPEALNHSMINLSLEEKDEKIGLF
GGTNDVEEDAAPTSPDLSTDAGSDNKETAVPQDVNPAGHSWFDFNDERVTEISVNSITNQ
FEGQQSAYMLFYRRKDLIRPDSSFGNSMYKIPKHVVEQIQEENIKLQNWREDYEKASNRL
DLYIHTENMCFVSNGLIQTSNPEGHLLQIDQRETVDDLLSKISQEQSTFFRRPKPKLKLK
KKYEDSSLKPSTQCVNTLHYMKVLPHAGIHLYECTSVRKDVSLYEAGIQSQVHLFAWDGD
KILGSNVAPGEENEPVLHHLICQHPDFTRRVSFSLPKSQPPDVIRERAAELMLTQQIEVK
EMVQDEVDNLETEGNKEEYEMEKYVKNYVADIVRSEEENEIKESSVEAQEDTISVHVKVR
NLGLHQSLKDVVTDFKVDKSMSVGCFTRLICSKLGVKKDEKYRISMLNEDQVVPLRNVDV
LEDLELTEDQMLLLEEGENLAASELVLFVRKFNEPHCSEYVAQVNWKLKQLYEDMHKEFQ
LPDDEWHLRRCSCYGDMLGVLEPTDDEIPLKNGDYVMVSHGKLAEKGNIRMRVWLFPTLP
DFKSKFKDFKHDQLVQGSVEDARRRRSKEVDASTIQNMKELKEIGPCNCGHIELKRDSTL
YDLKRLLALKISKELQSEAAELRYRVLERSSLTRVIDKETTNEEVTLKRLKLSSSTQIAV
QPAECKLQSNELLLTVVLHVPGTRCYTEEMELITEKAAPKLGQVFAEILNVVVDDLIIAR
KFVEKNEWTVIQTDDSNDSPTKTKPSKSGKRGKRLSGKRKSLKTQKESIQLKHGDVIGVK
IKSLEEKSSFELDLIDFDTEEDIFMQKKLKEIKEKSQEFNKSHDGANDQVLDNDSNNAIK
TVNAKNNKEKENTLKIHVDNFSESCNGLPTS
NT seq 4056 nt NT seq  +upstreamnt  +downstreamnt
atgtttggtaacttatttgaggatggtagtaatatggcttgtagaaatgctaaatccgtt
ctttcaataaatgggaaacctattgaacaaccaccagaggaaaggggggaacaaagtctg
attggaattcaaaaccagggagctacatgctacctcaactcactgattcagacgctgttc
cttaccccagaatttcgtgagcagctgtttgatattggctgtgaggaattgggaaaatct
ggacctaataagaaagatggaaaggtgcgtaagattccacttcagcttcaacttttgttt
gctcggttacttttaataaatcagtcaagttgcaaaacagaagacttgaccgacagtttc
ggatggagaaacagtgaagagatgcagcaacatgatgtgcaagaattaagtcgtattcta
tttgatgccattgaaaattctttggttggaacatctggtgataaattaattcacaatctt
tataaaggggtgatcgtcaaccagatccagtgttgtatatgccaacgagtaagtgagcga
gatgaggagtttcttgacctcactgtatcagtaagcggaggaaagaatcttcaatcctcc
ctctcatctgtcttccaagctgaagaaatgatgtccgggaaaaatcaatatttttgtgaa
aaatgcaagaaattggtcaatgctaaaaagggagcaaaattgaaaactcttcctcccatt
ttaactctctcacttctacgattcaactacgacttgagaactttcaaccgatacaaagag
acaggccactttccgtttcctatcaaactaaacgtggagaaatattgcaaacaacataat
gtgaatggagatggggacgggacagataaagataagccaccatgcacagaatattcttta
tattctgtcatcattcacactggaaatgcacatcgtggtcactaccatgcctatataagg
gatgtggatggattggaaaaagcaaaacttccaattgtggatcctgaacctgattttgag
atgtccacaacaacatcaaaagccccaacgatggtagttgtacaaaaacgaagtgaacct
gtcaatccaaatgataatattgaagaaacacttgcttgcttaattgctcaacaaggcagt
gtaaagttggaccaactgagcatgaaactgcggtatgagactggtatctcctggaacaag
aaatatcgcaagaaacacggatctttgagcaaatttcttctttcctgtcctaacacattc
gtggtggataacgagaacaactcagtctatctatgcagccaaccaagtgaagacagtaat
caaaaactgattacaaatcaactggaaaacataaacggtagccaacagttcccagaagca
ctgaaccattccatgataaatttatcgctggaggaaaaagacgaaaaaatcggtttattc
ggaggaacaaatgatgtagaagaggatgctgctcctacatctccggacctttctactgat
gcgggttcagataacaaagaaacagcagttccacaagacgttaaccctgctggccattcc
tggtttgatttcaacgatgaaagagtgactgaaatcagcgttaattcaatcacaaatcaa
tttgaaggacagcagagtgcttacatgcttttctacagacgtaaagatttgatccgacca
gattcaagttttggcaactctatgtacaagatacccaagcatgtggttgaacaaatacaa
gaggaaaatataaagcttcagaactggagggaagattatgaaaaagcatcaaatagactt
gacttatacatacacactgagaacatgtgttttgtttcaaacggtttgatacaaacaagc
aatcctgaaggtcatttgcttcaaattgatcaaagggaaacagttgacgatttgctgagc
aaaatttcccaggaacagtcaacgttttttcgccgacccaaaccaaaactaaagttaaaa
aagaaatatgaagattcaagcctgaagccaagcactcagtgtgtgaataccttgcactat
atgaaggtgcttccccatgcgggaattcacctgtatgaatgcacatctgtgagaaaagat
gtgagcttatatgaagctggtattcaatctcaggttcatctatttgcatgggatggtgat
aagattctgggatcgaatgttgctcctggagaggagaatgagccagtccttcatcacctc
atctgtcaacatccggatttcactcgtcgcgtttccttttctcttcccaaatcacagcca
ccagatgtcatcagggagcgagctgctgaattaatgctgactcagcaaattgaagtgaaa
gaaatggttcaagacgaagtggacaatttagaaacagaaggcaataaagaggaatatgag
atggaaaagtatgtgaaaaattatgttgcagacattgtgagatcagaagaggaaaatgag
ataaaggaatccagtgtagaagcacaggaagatacaatatctgttcatgttaaagtgagg
aatcttggattacatcagagcttgaaagatgttgtaactgattttaaagttgacaaatca
atgtcagttggctgctttacgaggctcatttgctcaaaactgggggttaaaaaagatgaa
aaatataggatttctatgctaaacgaggaccaggttgttccgctgagaaatgttgatgtg
ctggaggaccttgaactcacagaagatcagatgttgcttttggaggaaggtgaaaacctc
gcggctagcgagctggttttatttgttcgtaagtttaatgaacctcactgtagtgaatat
gttgctcaagtaaactggaaactaaagcaattgtatgaagacatgcataaggagtttcaa
ttgccagatgatgaatggcacctcagaagatgtagttgctatggtgatatgctcggagta
ttagaaccaacagatgatgagataccactgaagaatggagattatgtgatggtgagccat
ggaaagttggcagagaaaggaaacataagaatgcgtgtttggttgtttccgacgttaccc
gactttaaatcaaaattcaaggattttaaacatgatcaacttgtacaaggaagtgtggag
gatgcaaggaggagaaggagcaaagaagtggatgcaagtaccatccagaatatgaaagag
ttaaaggaaattggtccttgcaactgtggccacattgagctcaagagagatagtacatta
tatgacttgaaacgattgctggctttaaagatttcaaaagagttgcaaagtgaagcagca
gagttacgataccgtgtattagagcgttcgtcactgacgcgggtgattgacaaggaaaca
acaaatgaagaagttacattaaaaagattgaaactttcctccagcactcaaattgctgtt
caaccagcagagtgtaaactacagtcgaatgaactacttttgacagtagttctccacgta
cctggtactcgctgttatactgaagaaatggagctgattactgaaaaagccgctccaaaa
cttggccaagtttttgcagagattcttaatgtggtggtggatgatttaataattgctcga
aagttcgttgaaaaaaatgaatggacggtcattcaaactgatgattcaaacgattctccg
acaaaaactaaaccaagcaaaagcgggaaacgtggtaagagactttctgggaagaggaaa
tctctcaagactcagaaagaatcaatacagttaaagcatggcgatgtaattggagttaaa
attaaatctttggaagaaaaatcatctttcgaacttgatctgattgattttgatacagag
gaggacatttttatgcaaaaaaagttaaaggaaatcaaagagaagtcccaagaatttaac
aagagccacgatggtgctaacgatcaagtcctagacaatgattccaataatgcaattaaa
actgtgaatgccaaaaacaataaagaaaaggaaaatacactgaaaatacatgttgacaat
ttttcagaatcttgtaacggtcttcccacctcttga

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