KEGG   Ciona intestinalis (yellow sea squirt): 100179431
Entry
100179431         CDS       T01056                                 
Name
(RefSeq) claudin-1-like isoform X3
  KO
K06087  claudin
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cin03037]
    100179431
   04147 Exosome [BR:cin04147]
    100179431
Cilium and associated proteins [BR:cin03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100179431
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   100179431
  Exosomal proteins of colorectal cancer cells
   100179431
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 PMP1_2 ATP1G1_PLM_MAT8
Other DBs
NCBI-GeneID: 100179431
NCBI-ProteinID: XP_009859999
Position
10:4081591..4089286
AA seq 215 aa
MSGSISYLGLVLTLISTIGIIFTTIYREWKRNSVQASQQVLDRLYSCEGLWVRCTSPTPG
QFQCDDYDTALLGLPPALQGMRAMMCISVLFIIVAVVCSIVSLPCTAALAEKQKLYASRV
AGICAMLAGALCIASVSWYAANIVFEFWSFASINDPFKYEFGSALYVGWIAGGCALISGA
LMACCNCGNEETDSYPAYTYKPPKASGGGNNTEYV
NT seq 648 nt   +upstreamnt  +downstreamnt
atgtccggatccatctcttaccttggtttggtcctaactctcatctcaactattgggatt
atatttaccacgatttaccgtgaatggaaacgtaacagcgtacaagcttctcaacaagtt
cttgaccgtctttactcgtgtgaggggttatgggtacggtgtacctcccccacaccaggt
cagttccaatgcgatgactacgacacagcacttttaggattgccaccggcacttcaagga
atgagagcgatgatgtgcatctctgttttgttcatcatcgttgcagtcgtatgctccatc
gtctccctgccctgtaccgccgccctagcggagaaacagaagctctacgctagcagggtg
gcgggcatatgtgctatgcttgcaggcgcactctgcatcgcttctgtatcttggtatgcc
gccaacatcgtattcgagttctggagtttcgcttcaataaacgacccgtttaaatatgaa
ttcggatccgccttatatgtcggttggatcgcaggggggtgtgcacttatctccggggca
ctgatggcttgttgcaattgtggaaacgaagagactgacagttacccagcttacacctac
aagcctcctaaagcatctgggggtggcaacaacacagaatatgtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (289)   
   KEGG ORTHOLOGY (1)   
   RefGene (285)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (303)   

Download RDF
DBGET integrated database retrieval system