KEGG   Ciona intestinalis (sea squirt): 100181525Help
Entry
100181525         CDS       T01056                                 

Definition
histone deacetylase 9-like
Orthology
K11406  
histone deacetylase 4/5 [EC:3.5.1.98]
Organism
cin  Ciona intestinalis (sea squirt)
Brite
Enzymes [BR:cin01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100181525
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
10
AA seq 1094 aa AA seqDB search
MAKREEGNDELRTVTNGLGPQDTNENEHRMAVDPAVSALTPNFLAAVYGMGERQYQEKLK
RMRHQHEIENQLLMAQFNYQTSNLQHQHQLQQHLNHVISKQRERVAEQMAALDQRSELIN
SVRNKEKNRESAVASNAVKQHLQKFVKCRQKFKDSHPSMERSPLQWTPSLEGKNGGHEVP
AHYSSLLHTQYDFPLRKTASEPNLKLKSRLKQKLLEDRVERSSPLMPRRGDIKADLANRI
KKKINIENVNEQRNSHNSAPNSGPSSPPNSSNDIKQSTPHMQTETDYYEESNSSGNHDLY
SSPSLPNISIGLTNKKSTDRSMLVVSEELSKRGTRGSSLSDPMIQSDKPLFQSHAKLHEI
DLTQAVQANLLPPHKTVLHAQASTPPGPIRHSQTTRQHKALSRTQSAPTAASQLQLHILQ
RRQKMLQQQQKKGLMHGVAEVDSHSYSILPTHLETEDGEQWVKRNQYSHAQSTPNQPFIP
SNKIASTQAQLVASKPEIPDSMLPMFINKHSGRFGFLTCPAVARVAIEEGGIAGTRHLPP
QSTIPIHSQPSSLSDQNKPRLLRTQSSPATSFIKKLPHFKKYRYTTGIAYSPVMLKHGCA
CRDDHTEHAGRLRAIWERLTKSKLVNDPSCGGTSGKSSCELLEARKATTDELQLVHTQEH
TLRYGTTSLARKELELTSKFIVLPCGGVGVDNGIDIDTVWNELDTINAARMAVGCTVDIT
LEVAQNRLKNGFALVRPPGHHAQKDLAMAFCYFNSVAVAARKLQHECPDTVRRVLIVDWD
VHHCNGTQNIFFDDPSVLVISIHRYDSGNFFPGTGAINECGRGGGLGYNVNIGFSGGLDP
PMEDADYLAVFRTIVLPIARQFDPHFVLVSCGFSAANGHPSTLGGYKLTPNCYGLLTRLL
SEVAGGKIVLVLEGGFELEPLCDCTEACVRTLLGNHEYSNLSMESMERRPSKNAIDTIKN
VITIQEKHWKGLDLSSVDMSHLEWLRVSRENETCVAMASLSVENKSGNEPNTISEPEAHQ
QPVDLSNNKSTYQQPHQSADVYFYENCGGSMSADSSPLDVVGLSTPSSPATKQSDTMDTM
NQTSTTESQPMAGV
NT seq 3285 nt NT seq  +upstreamnt  +downstreamnt
atggccaaaagagaagagggaaatgatgaacttcgaactgtaacaaatgggcttggacct
caagatacaaatgaaaatgaacacagaatggctgtagaccctgcagtttcagcactgact
ccaaattttcttgctgctgtttatggcatgggagaacggcagtatcaggaaaaattgaaa
agaatgaggcatcagcatgaaattgaaaatcagctgttaatggcgcagttcaactaccaa
acaagcaatttgcaacatcaacatcaattgcaacaacacttgaatcatgttatctcgaag
caaagggaacgtgttgctgaacagatggcagcacttgaccaaagaagtgaactgattaat
tctgttcggaacaaagagaaaaacagagaaagtgctgttgcatcaaatgctgtcaagcag
catctacaaaagtttgtaaaatgccgacaaaaattcaaagattcacaccctagtatggag
aggtctccattgcaatggacaccatctttagaaggaaaaaatggaggtcatgaagtacca
gcacattattcctcattattacacacacaatatgactttccactaaggaaaacagcttcg
gaaccaaacctcaagttgaagtcgcgtttaaaacagaagttgttggaggacagagttgaa
aggtcgtcaccactcatgccacgtcgcggagatattaaggcagatcttgcaaatcgaatc
aagaaaaaaataaatatagaaaatgttaacgaacaaaggaattcacacaacagcgctcca
aactctggaccaagttcccctcctaattcatcaaatgacatcaaacaatcaacaccacac
atgcaaacagagactgattattatgaagaatcaaattcatctggaaaccatgacctttat
tcgtcgccctctcttccaaatatttctattggacttacaaataaaaaatcaactgatcgt
agcatgcttgttgtgtcagaggagttaagcaagcgaggaacccgaggatcctcactttcc
gatccgatgattcaaagtgataaaccattatttcagagccatgcaaagctacatgagatt
gatctaacacaagcagtgcaagctaacctgctgcctccacataagacagtgctacatgcc
caagcatccaccccaccaggaccaatacgtcactcacaaaccacacgtcaacataaagcg
ttgagtcggacacaatcagcacctactgctgcatcgcagttgcaactacatattttacag
cgacgtcaaaaaatgctacagcagcagcagaagaaaggtttaatgcacggtgtggctgag
gttgattcacattcttattcaatcctccccacccaccttgaaacagaggatggggaacaa
tgggtgaaacggaatcaatacagtcatgcgcagtcaacaccaaaccaacctttcattcca
agtaacaagattgcttctacccaagcacaattggtagcaagcaaacctgaaatcccagat
tcaatgctacctatgtttatcaacaaacattctggtagatttgggtttcttacttgtcca
gcagttgcacgagttgccatagaggaaggtggaatcgccggtacgcgacatctgccacca
caatccaccatacccattcacagccaaccatcatcacttagtgatcagaataaaccacgt
cttctgcgaacacagagttcaccagcaacatcatttattaagaagttacctcattttaag
aaatacagatacaccacgggcatagcttatagtccagtgatgttaaagcacggatgtgcc
tgtcgtgacgaccacacagaacacgcaggtcgactgcgtgcaatttgggagcgactaaca
aaatcgaagctggttaacgacccaagttgtggtggtacatcaggaaaatcttcgtgtgag
ttactggaagcaaggaaagcgaccacggatgagttacaactggtgcatacacaggaacat
acattgcggtatgggacaacttcacttgcgaggaaagaactagaattgacaagcaagttc
atagttctcccatgtggtggtgtgggcgtggataatggaattgacatcgatactgtgtgg
aatgaacttgataccatcaatgcagcacgaatggctgttggttgtacggtagacatcaca
ttagaagttgcacagaatcgattgaagaatggatttgctctcgttcgaccaccaggacat
catgctcagaaagatcttgcaatggctttctgttactttaactcagtagcagtggctgca
aggaaattacaacatgaatgtccagatacagtgagacgtgtgcttatagtggattgggat
gtacatcattgtaatggaactcagaatattttctttgatgatccatcagtgcttgttata
tccatacatagatatgattctgggaacttttttcctggaactggagccattaatgagtgt
gggcgtggaggagggcttgggtataatgtgaacatagggttcagtggtgggcttgatcct
cccatggaagatgccgattacttggctgtttttcgcacaattgttcttcccattgcccgt
cagtttgatcctcactttgtcctcgtgtcgtgcgggttctcggcagccaacggacatcct
tcaacactaggtggctacaagctgacccccaattgttacgggttgctgacaagattatta
tctgaggtagcaggtgggaagatagtgttggtgttggagggggggtttgaacttgaaccc
ttgtgtgattgcacggaagcttgtgttcgaacattgcttggcaaccatgagtattctaat
ttatccatggaaagcatggagagaaggccatctaaaaatgcaattgataccattaaaaat
gtcatcactatacaagaaaaacactggaaaggattagatttatcatctgttgatatgagt
catctcgagtggttgagagtttcaagagaaaatgaaacttgtgttgctatggcttcactt
agtgtggaaaataaatctggaaacgaacccaacactatatcagaacccgaagcacaccaa
caacctgtggatttgtcaaataacaaatctacttatcagcaacctcatcagtccgctgat
gtgtatttttatgaaaactgtggtggatccatgagtgcagattcctcaccattagatgtg
gttggtttgtccacaccttcatcacctgcaactaaacaatcagataccatggatacaatg
aaccaaacatctacgaccgagtctcaacccatggctggtgtatga

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