KEGG   Ciona intestinalis (yellow sea squirt): 100181775
Entry
100181775         CDS       T01056                                 
Name
(RefSeq) elongation factor 1-alpha, somatic form
  KO
K03231  elongation factor 1-alpha
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100181775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100181775
   03016 Transfer RNA biogenesis [BR:cin03016]
    100181775
   03012 Translation factors [BR:cin03012]
    100181775
   04131 Membrane trafficking [BR:cin04131]
    100181775
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cin04147]
    100181775
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     100181775
Transfer RNA biogenesis [BR:cin03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    100181775
Translation factors [BR:cin03012]
 Eukaryotic type
  Elongation factors
   100181775
Membrane trafficking [BR:cin04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    100181775
Exosome [BR:cin04147]
 Exosomal proteins
  Proteins found in most exosomes
   100181775
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA DUF34_NIF3
Other DBs
NCBI-GeneID: 100181775
NCBI-ProteinID: XP_002126815
Ensembl: ENSCING00000018894
Position
Unknown
AA seq 464 aa
MVKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEASEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETVKYYITVIDAPGHRDFIKNMITGTSQADCAVLVVAAGV
GEFEAGISKNGQTREHVLLAYTLGVKQMIIAVNKMDSTEPKYSEVRFNEIKQEVTNYIKK
VGYNPKKVAFIPISGFYGDNMLEPSDNMKWFKGAELPKGDKKETKRVMTLFEALDAIEEP
KRPTDKALRLPLQDVYKIGGIGTVPVGRVETGIIKPGMLVTFSPANITTEVKSVEMHHEA
LTEALPGDNVGFNVKNVSVKDIKRGMVAGDSKNDPPKEANTFNAQVIILNHPGQIHAGYA
PVLDCHTAHIACKFDQLLEKIDRRSGKKLEENPKSVKSGDAIIAVLKPSKPMCVESFSEY
PPLGRFAVRDMRQTVAVGVIKSVEKKEAGAGKVTKAAQKAAKKK
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggttaaggaaaagcttcacatcaacattgtagtgataggccacgtcgactccggaaag
tcaacgaccactggtcatctaatctacaaatgtgggggcatcgataaaagagcgatcgag
aaattcgaaaaagaagcatccgagatgggtaaaggatcgttcaagtatgcctgggtgttg
gacaaactgaaagcggaacgagaaagaggaatcacaattgatattgcactttggaagttt
gaaacggttaagtattacatcacggttattgatgcacctggtcaccgagatttcatcaaa
aacatgattactggaacatcccaggccgactgtgccgtcttggttgttgcggctggggtg
ggagagttcgaagcagggatatcgaagaacggacagacaagagagcatgttcttcttgcc
tacacccttggagttaaacaaatgatcatagctgtcaacaaaatggacagcactgaaccg
aagtattcggaggtgcgtttcaatgaaataaaacaggaagtgacaaactacattaaaaag
gttggctataatcctaaaaaggttgcttttattccaatatctggcttctacggagataat
atgttggaaccatcggacaatatgaagtggtttaagggagcagaattaccgaagggagat
aagaaggaaaccaaaagggtcatgactttgttcgaagctttggatgcaatagaagaaccg
aaacgaccaaccgataaagcgctaagattgcctctgcaagacgtttacaaaatcggagga
atcggcacggttccggttggtcgggttgagactggtattataaaaccaggcatgctggtg
acgttttcacccgccaacattactacggaagtcaagtcggtagaaatgcaccacgaagca
ctgaccgaagcacttccaggagacaacgttggttttaacgttaagaacgtatcggtgaag
gatattaagcgtggtatggtggcaggagattccaaaaacgatccgccgaaagaggcaaat
acttttaatgcgcaggtaatcatactgaaccatccgggccaaatacacgcaggatatgct
cctgttctggattgccacaccgctcatatcgcttgcaagttcgatcaactattggaaaaa
attgatcgtcgttctgggaagaagcttgaggaaaacccaaaaagtgtgaaaagtggtgac
gccataattgctgtactgaaaccctcaaaaccgatgtgtgtcgaatcatttagtgaatat
ccaccactaggtcgctttgctgttcgagatatgagacaaactgttgcagttggggtgatt
aaaagtgtcgaaaagaaagaagccggtgccggaaaagtaacaaaagctgcacaaaaagcg
gccaagaagaaataa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (168)   
   KEGG ORTHOLOGY (1)   
   RefGene (163)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (185)   

Download RDF
DBGET integrated database retrieval system