KEGG   Ciona intestinalis (yellow sea squirt): 100182872
Entry
100182872         CDS       T01056                                 
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like isoform X2
  KO
K06258  MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100182872
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cin02000]
    100182872
Transporters [BR:cin02000]
 Major facilitator superfamily (MFS)
  Protein transporters
   Vesicular neurotransmitter transporter (VNT) [TC:2.A.1.22]
    100182872
SSDB
Motif
Pfam: Sugar_tr MFS_1 OATP MFS_2
Other DBs
NCBI-GeneID: 100182872
NCBI-ProteinID: XP_002120952
Position
14:complement(2456520..2463855)
AA seq 530 aa
MEYLVPVDANNDTPLSDVDENDRLVGNNRKATYKVASAQAGFGRWHYLLLLQCGWANASD
AIEIMCISFTISSVHASLKLSNSSLTWLTIVLFLGMMIGGYLWGTLADYWGRRRVVIFSL
ALNGIFGTFSAIAPNYGVLLTLRFISGIGAGGSLPVCFSYFSEFQPRDKRGMMISALATS
WMVGNVIAAGLAWGLLPYSASISAYSPNGDQWRLFIIICAIPSLTSSVFFFFMPESPLYL
YRRGDFQKSLAVLKIVNKFNHPGTPLQFDTIVPDDDCPTTSRIKGSRSGSTSFWLSSCPR
RCLYWLVSGLYAMKVQLAIFFGSDRNTRKKSVLMMSIYFATAFSGYGITMWLPTLMARTE
QNAGSPCSGHIVLNKSSTSVNDSEMYIDVFIGATAQLPANIASILVMDRVGGKVILVFSM
FMSGVSVLLFWLVHNKLQVIIMSAIFNGVSTLAWNALDVLTPEMYETAVRASSTGILTAL
SRIASILGNLTFGLFMDYNCSIPILICAAVFLLGGVLSIFLPQTRNIELD
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggaatacttagttcccgtagatgccaataatgatactccgttgagcgatgtagacgaa
aatgatagattagtaggaaacaatcggaaagcaacttacaaagtagcttctgcacaagct
gggtttggaaggtggcattaccttcttttattacaatgtggatgggcgaatgcaagtgat
gcaattgaaatcatgtgcatttcattcactatctcatcagtgcatgcttcacttaaactt
tcaaactcaagtttaacttggttgactatagtactgttcctaggcatgatgattggagga
tatctgtggggaacattagcagattattggggtaggagaagggttgtgatattctcatta
gctctaaatggaatatttggtacgttctcagctattgcaccaaactatggagtattgctt
acactgagatttataagcggcattggtgctggtggttcgctccccgtttgtttctcatac
tttagtgagtttcaaccaagagataaacgtggcatgatgatcagtgctcttgctacttca
tggatggttggaaatgtcattgctgcaggtcttgcatggggattgcttccgtattcagct
tcaatatcagcatactctcctaatggtgatcagtggaggttgtttataataatttgtgca
atacccagccttacatcatctgtgttcttcttcttcatgccagagagcccactctacctt
tatagaagaggagattttcaaaaatctttagcggttttaaaaattgtgaacaaatttaat
cacccaggaaccccactacagtttgacaccatagttcccgatgacgattgcccaaccaca
tcaagaatcaagggttcacgttccggttcaacttctttttggttgagtagttgtccaaga
agatgtttatattggcttgtgtctggtttgtatgccatgaaggtacagttggcaatcttc
tttggctcagacagaaacactcgtaaaaagtcagttcttatgatgagtatctactttgct
actgcttttagtggatatggaattacgatgtggttgccaactttgatggcacgaacagag
cagaatgcaggttccccatgtagtggccatattgtgttaaacaaatcatctacaagtgtt
aatgattctgagatgtacattgatgtatttatcggtgccactgcacaactaccagccaat
attgcaagtatattggttatggatagagttggaggaaaagtgattttagtgttttcaatg
ttcatgagtggtgtaagtgtcctattattctggcttgtccacaataaattgcaggttata
atcatgtcagctatatttaatggagtttcaactcttgcatggaatgcactggatgtttta
acacctgaaatgtacgagaccgcagttcgggcttcttctacaggaatattaacagcttta
tcaagaatagcatcaattcttggaaacttaacatttggtctcttcatggactacaattgc
agtatacctattttaatctgtgcagctgtgtttttattaggcggtgttttgtctatattt
ttgccgcaaaccagaaacatagaactagattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (68)   

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