KEGG T01056: 100183031

Ciona intestinalis (sea squirt): 100183031

Entry

100183031 CDS T01056

Definition

uncharacterized LOC100183031

Orthology

K13505

vesicle-associated membrane protein 3

Organism

cin Ciona intestinalis (sea squirt)

Pathway

cin04130	SNARE interactions in vesicular transport
cin04145	Phagosome

Class

Genetic Information Processing; Folding, sorting and degradation; SNARE interactions in vesicular transport [PATH:cin04130]
Cellular Processes; Transport and catabolism; Phagosome [PATH:cin04145]

SSDB

Motif

Pfam:

Synaptobrevin Fijivirus_P9-2 Tmemb_cc2 ERM

Other DBs

NCBI-GI:

198418373

NCBI-GeneID:

100183031

Position

AA seq 173 aa
MSYGGTSNYGGPAAPTGGSSQASKKLQQTQAQVDDVVDIMRTNVDKVLERDQKLSELDDR
ADALQQGASQFETQAAKLKRKYWWKNCKMIIMLSVVILVIVAVIINVGDPHHRYTCYYHY
YSCLLLHEIIPSIRCHPNTEENLSINMDTILMTVAGSLPRIIQLSPATLLSLT

NT seq 522 nt +upstreamnt +downstreamnt
atgtcttacggaggtacatctaactatggaggtccagctgcaccaactggaggttcatcc
caagcttccaagaaactccagcaaacacaagcacaagtggatgatgttgtggacatcatg
aggacaaatgtggacaaagtgctcgagagggatcagaagttatctgagctagatgacagg
gcagatgcattacagcaaggcgcgtcccagtttgagactcaagctgcaaaactgaagaga
aagtactggtggaagaattgcaagatgataatcatgctatcagtagttatactggtcata
gttgcagttattattaatgtgggcgatcctcatcatcgttatacttgttattatcattat
tatagttgtttacttctccacgaaataatccccagtatccgttgtcacccaaacacagaa
gaaaacttaagcataaacatggacacaatactgatgactgttgctggctcactaccgaga
atcattcaactatcaccagcaacattattatctttaacctaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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