KEGG   Ciona intestinalis (yellow sea squirt): 100183355
Entry
100183355         CDS       T01056                                 
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
  KO
K07583  tRNA pseudouridine synthase 10 [EC:5.4.99.25]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cin03016]
    100183355
Enzymes [BR:cin01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     100183355
Transfer RNA biogenesis [BR:cin03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    100183355
SSDB
Motif
Pfam: Pus10_C Pus10_N_euk DUF5332
Other DBs
NCBI-GeneID: 100183355
NCBI-ProteinID: XP_002122785
Ensembl: ENSCING00000000773
Position
Unknown
AA seq 515 aa
MESVCESKTICALALKYCPRCIARLLRFERPILLKNDLEIVTLLEQKFDVQLSEPISKNG
NGQTETDEKQCNGKLTNDTDCHACLGILRSSFVTQCADLVLKKVEKSSYKFDCYQLLYFL
PIQLIAFTKQSIEDFKNIASGETDIYEVKELFKVLLEPLVTDRLKCKRVHEASMEISLHV
KHEQSEVNLLPEIRKKIPKQKDNRRNRRNFYAKQPKTEEQPKTEEPPITIAQLNSALSNM
SNDEINILCENYKTPCTLDQIGLFHTPVFVAGRYNKYSRTLPQTPWILDGKRKLESSVQE
LISGSVELKFGADRSNFSSSGREDVDVRMLGRGRPFILELIDPRISTCSTDEMKDLQTKI
NSSTDLVRVRDLQIVEKSDCKTLKQGEEEKTKSYSALCCFLDTPGQETIEKLELLRQKNG
VIVYQNTPIRVLHRRPLASRPRCIHTMVADRLTDSEPRLFKLRLCTQAGTYVKEFVHGDF
GRTSPSLRDLVGAEVDILCLDVDSVDVKWPPVVPE
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggaatctgtctgtgaaagcaaaaccatttgcgcattagcattaaagtactgccccagg
tgtatagcgaggttactgcgatttgaacgacctatcttgcttaaaaacgacctggaaata
gtaacgttactggagcaaaaatttgacgtgcaattgtcagaaccaatatcgaaaaatggg
aacggtcagacagaaaccgacgaaaagcaatgcaatggtaaattaacgaacgacacagac
tgtcatgcgtgtctcggtatcttaagatccagttttgttacacaatgtgctgatttggtg
ttaaaaaaagtggaaaaaagctcctataaattcgattgctatcaactgctatatttcttg
ccgatccagctaatagcatttacaaagcaaagcattgaagattttaaaaatattgcttcg
ggagaaactgacatttatgaagtaaaagaactctttaaagttctattggaacccctagta
actgacagactgaagtgcaaacgcgtacacgaggcttctatggagatatctctgcatgta
aagcatgaacagagtgaagtaaatcttctgcctgaaattcgcaagaaaattccaaaacaa
aaagataatcgaagaaatagaagaaatttctatgcaaaacagcctaagactgaagagcaa
cctaagactgaagagccccctatcaccattgctcagttaaactctgcactaagtaacatg
tcaaatgatgagataaacattttgtgcgaaaattacaaaacgccttgtactttggatcaa
attggacttttccatacaccagtatttgtggctggcagatacaacaagtacagtcgcaca
ttgccacaaactccatggatattggatggtaagcgcaaacttgagagctctgttcaggag
ctaatctctggatctgtggagctaaaatttggagcagatcggagcaacttttcctcctcc
ggaagagaggatgtagatgtgaggatgctgggaagaggaagacctttcatccttgaactg
atagacccccgcatctcaacttgcagcacagatgagatgaaagatcttcaaacaaagata
aattcatctacggatctggttcgtgtaagagatctccagatcgtcgaaaaaagcgactgc
aaaactttgaaacaaggagaagaagaaaagacaaagtcatattctgctttatgctgtttt
cttgacacgccgggtcaggaaactatagaaaaactagaattactgcgccaaaaaaacggg
gtaatcgtgtaccaaaacacccctattcgtgttctacaccggcgcccgctcgcctcgaga
ccacggtgtattcacaccatggttgcagataggttaacagacagtgaacctcggctgttt
aagttacggctgtgtacgcaggccgggacgtacgttaaagagtttgttcatggtgatttt
ggacgcaccagtcctagcctgcgcgacttggttggagcagaagtcgacatactatgcctg
gacgtagattcagtcgacgttaaatggccaccagttgtaccagagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (52)   

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