KEGG T01056: 100184572

Ciona intestinalis (sea squirt): 100184572

Entry

100184572 CDS T01056

Definition

alpha-(1,6)-fucosyltransferase-like

Orthology

K00717

glycoprotein 6-alpha-L-fucosyltransferase [EC:2.4.1.68]

Organism

cin Ciona intestinalis (sea squirt)

Pathway

cin00510	N-Glycan biosynthesis
cin00533	Glycosaminoglycan biosynthesis - keratan sulfate
cin01100	Metabolic pathways

Class

Metabolism; Glycan biosynthesis and metabolism; N-Glycan biosynthesis [PATH:cin00510]
Metabolism; Glycan biosynthesis and metabolism; Glycosaminoglycan biosynthesis - keratan sulfate [PATH:cin00533]

SSDB

Motif

Pfam:

SH3_9 IncA O-FucT SH3_1 Lant_dehyd_C SH3_2 Laminin_II TBPIP

Other DBs

NCBI-GI:

198422544

NCBI-GeneID:

100184572

Position

AA seq 491 aa
MSNPAPTYYRQPPAENSKGGLIWRGATGLLYSSLSKALQLQELLSQDLTKIKQNPEKLGD
LLSTLKRHLNPLENSLVNDLITMQKNIDTNNNEIKKLNKLAQELIRKTQNPPDCRTAKKL
HCDLRRTCGFGCLFHHYGICLFVAIGTNRVMQVKWGNIRAYPGIPKTFRNISDTCINATG
FEQAIEWKSKGEKNSTSEDAEIVKLIIQKPRDRHTPFSPWTVPANFLPRIEAVHSNPMLW
WIGQVQSYLMRPQEWLLNDLETCKKEIGFDHPIVGVHIRRTDKISEAAYVDLSRYMVHAK
NWFDRYAEKNPNKSFKKRIYLATDEVNVTLEANERYPEYQFISGLPNASFHAAKRREEET
VKYLLHDVYLLRDCDYFVGTFSSNIGQMVYELRQALDRDTTFEAVSLDNTYLYIGQSTRY
QKAIMNHIGICQKFVDRKECEIDLRVGDRIKVNPKVNKGYMYGGRNMRTGRAGLYPAYKV
RDIVTPARYPF

NT seq 1476 nt +upstreamnt +downstreamnt
atgtctaatcctgccccgacctactatagacaaccgccagcagaaaacagcaaaggcggg
ctcatatggagaggggcgactggtttattgtacagttcgttgtcgaaagcactgcaatta
caggaacttcttagtcaagatctgacaaaaataaaacaaaatcctgaaaaactgggagat
cttctttcaacgctaaagcgacatttaaatccgttggaaaactcacttgtgaacgatttg
ataacgatgcaaaagaacatagacacaaacaacaacgaaataaaaaaactgaacaagtta
gcgcaagaactcattcgaaaaactcagaacccgccagattgcaggacagcgaaaaagttg
cactgtgacttgcgaagaacgtgcggattcggctgccttttccaccattatggaatctgt
ctgtttgtagctatcggtaccaatagggttatgcaagttaaatgggggaatataagagcg
tacccaggaattccaaagacttttcgaaatataagcgatacttgtataaatgcgactggt
tttgaacaagcaatagaatggaaaagcaaaggcgagaaaaactcgacttcagaagacgct
gaaattgtcaaattaattatccagaaacctagagacagacacacaccgttttcgccatgg
actgtacccgccaactttttgccacgcattgaagcagtacattctaaccccatgttatgg
tggataggacaagttcaaagctaccttatgcgtcctcaagaatggctgctaaacgactta
gaaacttgcaaaaaggaaatcggctttgatcatccaatagttggcgttcatataagacgt
acggataagattagtgaagctgcctacgtcgatttatcaagatacatggtgcatgcgaag
aactggtttgaccgttacgccgaaaaaaatccgaacaaaagtttcaaaaaacgaatttat
ctcgctacagatgaagtaaatgtgaccctagaagcgaacgaaagatatcctgaataccaa
ttcatcagcggtttgccgaacgcgtcgtttcacgcagcgaaaagaagggaggaagaaaca
gtaaagtaccttctacacgatgtttatctgctcagagactgcgactattttgttgggaca
ttttcgtcgaacattggtcaaatggtgtacgaattgcgacaagcgttagaccgagacact
acattcgaagctgtcagtttggacaatacgtacttatacatcgggcagagtacaagatac
caaaaagctattatgaatcacatcggaatttgccaaaagtttgtcgaccgcaaagaatgc
gaaattgatcttagagtaggggacagaataaaagtcaacccgaaagtgaataaaggttac
atgtatggcgggcggaatatgagaaccggacgggctggtttgtaccccgcttataaagtg
agggacattgtaactccagcgcgctatccattttaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

Download RDF

DBGET integrated database retrieval system