KEGG   Ciona intestinalis (yellow sea squirt): 100185688
Entry
100185688         CDS       T01056                                 
Name
(RefSeq) protein transport protein Sec31A isoform X1
  KO
K14005  protein transport protein SEC31
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100185688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100185688
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cin02044]
    100185688
Membrane trafficking [BR:cin04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100185688
Secretion system [BR:cin02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   100185688
SSDB
Motif
Pfam: WD40 Sec16_C MIOS_WD40 SRA1 Prp18
Other DBs
NCBI-GeneID: 100185688
NCBI-ProteinID: XP_026696650
Ensembl: ENSCING00000007457
Position
2:complement(1443211..1468324)
AA seq 1215 aa
MVKIKQVNVGANYAWSPAENHPVYIAAGTAAQQLDATFSSNAKLELYAVDMTDDNYNIKC
AGSIETENRFQKVVWGSGYAENPTTSGLIVCGTDKGGIEIYNPEKILENEVDCILSNSKH
TGPVRSLDFNNFQKNLFASGANDSEIYIWDLKNPSNPMTPGTKTQPTSAVGALAWNKQVQ
HILASTSSLTSGPCCVVWDLRKNEPIIKVQDPSGRMQCSDVSWHPDVATQLVLSSEDDHL
PVVQLWDLRFATSPMKVLEKHSKGVLSVSWCKQDSDLLLTCGKDNHIYCWNPNGSPPEIL
CELETGAQWCFDVQWCPRNPNILSTGSFDGCISIHSIMGGSPVQSNDQNQAQRNKIADAF
GSDAFAGDAPQQQHTQPKKTIPLKKPPKWMRRPCAASFSFGGKLVSFENNQTTENQHQTS
SHRTVKISQVVTEVELLERSADLRKALTDDTQCTAYCHRKLEKAQSEFEENFWSFLKVNF
EPEPRKEFLQLLGYNPVELTAKFSKVLGTTTNGISSGIDSLSISAKSESGDDNVSNGASS
SNGLDAFEQIAVAQETKKQEEEIKPMVIPVADGDIDSLISQALLIGDYEAAVDLCLHSNR
MADAIVVAMAGGSKLLEKTQKRYFDASESKISRLLSAVVTKNWADVVKSCDLENWKEALA
SLLTYASPQDLISLCDELGERLEANPELKSHACLCYICSGNIERLVRCWSSVNSQDNNGN
DIQDLIEKMMVLHRVAEQRSQGGSAASMGEASSEKLSEYAHMLASQGQLGAAMEMLPAHS
DKISIQILRDRLYHSQGDTVVGYQPPVFPFSRDGSRVGHRPEAQVQPRRQMGAKGSGMYQ
QQQHLQHAHQPTSTSRPLQPQISAQIPNYQPPSVPSPHRPQVNNPYARPMQQPSYSGPQA
PSNIFTPPSVAPTSQVTGMMPVQAPSAPYQPYMAPTPQTMSQSMGNPPQPPSNMYAPDME
KKHNSGGWNDPPALDPNRVPKKKKPTTVQSPPVANFLVPSQPAIPHDVYKQPTPKPIDPA
QLNLMTPAAPVHNPMGNMMRPGVSPMMGGVQPSNNMMQNVPPPPPMATNYYAEERDELDH
SFSDDESSAPAPSVPTGALKDTPKSPIPAEHQILQVQFDQLIKKALNQNPNQQIKRKLDD
CSRRLEFLYDKLRANSLSPNIIGGLHQVAQSMESRDYANGLRHHTRIVTQSNFSEISAFM
PGLKSLLQIAGQLRI
NT seq 3648 nt   +upstreamnt  +downstreamnt
atggtcaaaattaaacaagtgaacgttggggcgaactatgcatggagtccagcagaaaac
caccccgtgtacattgcagcgggtaccgcagctcaacagctggatgccacatttagttcc
aatgcaaaacttgaattgtatgcggtggatatgactgatgacaactacaatatcaagtgt
gctggctccatcgagacagaaaacagatttcaaaaagtggtgtggggaagtggttatgca
gagaatcctactaccagtggattgattgtgtgcggtacagacaagggtggtattgaaatt
tataacccagagaaaattttggaaaatgaggttgactgcatactttccaactcgaaacat
accggacccgttcgatcacttgattttaataattttcagaaaaacttatttgcttctggt
gcaaatgacagcgaaatttatatttgggatctgaagaatccatccaaccctatgacccct
ggaacaaaaacgcaacccacatcagcagtaggagcacttgcctggaacaaacaggttcaa
cacatcctggcttctacaagttcgcttacatcaggaccttgttgtgtcgtgtgggatctg
aggaaaaatgaaccaattattaaagtccaagacccctccggaaggatgcagtgtagtgat
gtctcttggcatccggatgttgcaactcagttggttctttcttctgaagacgatcatctt
ccagttgttcaactgtgggatttaagatttgcaacctcaccaatgaaggttttggagaag
cacagcaaaggtgtgctgtctgtatcatggtgcaaacaagattctgatttgcttcttaca
tgtgggaaagacaaccatatatactgctggaatcctaatggttctccaccagaaatatta
tgcgagcttgaaactggagctcaatggtgtttcgatgtacagtggtgtccacgcaaccct
aatattctttcaaccggatcttttgacggttgcatttccattcattctattatggggggt
tctcctgtccaaagtaatgaccagaatcaagctcaaagaaacaagattgctgatgccttt
ggtagtgatgcttttgctggggatgctcctcaacagcaacatacacaaccaaagaaaaca
attcctctgaagaaacctccaaagtggatgagaagaccatgtgctgcctcattttcattt
ggagggaaattggtttcatttgaaaataaccagacaacagaaaaccaacatcaaacttca
agccatagaacagttaaaataagtcaggttgtaacagaggtggaattattggaacggtcg
gcagatttacgaaaagcgctcactgatgacactcagtgtacagcttactgtcaccgaaaa
ctagagaaagcacaaagtgaatttgaagaaaatttttggagttttttgaaggttaatttt
gaacctgaaccaaggaaagaatttcttcaattacttggttacaatccagttgaactcaca
gcaaagttttcaaaagttttgggaacaactacgaatggtatttcatctggtatagacagc
ctgtcaatcagtgcaaagagtgagtctggagatgacaatgtaagcaacggtgcgagttcc
tccaatggacttgatgcttttgaacaaattgctgttgcccaagaaacaaagaagcaagag
gaagaaattaagccaatggtcatacctgttgctgatggagatattgacagtttgattagc
caagctcttctgattggagattacgaagctgcggttgatctctgtctccatagcaaccgt
atggcggatgctatcgtcgtggcaatggcgggaggatctaaacttcttgagaaaacacaa
aagcgatatttcgatgctagtgaatcaaagatatcaaggcttttatccgcggttgttacc
aagaattgggcagatgtggtgaagtcatgtgacctggaaaattggaaggaagcattggcg
tcgttgcttacatacgcctcacctcaggatcttatctcgctgtgtgatgagcttggtgaa
agattggaagccaaccctgagttgaaatctcatgcatgtttgtgctatatttgctcgggg
aatattgaacgtctggttcgatgttggagtagtgttaattcccaagataataatggaaat
gatattcaggatttaattgaaaaaatgatggtgctccatcgtgtcgctgaacaacggagc
caaggtggttcggcagcgagcatgggagaagcctcgagcgaaaagctttctgaatacgct
cacatgctggcatcgcagggtcagcttggagcagcaatggaaatgctaccagcgcattca
gataagatctcaattcaaatcttacgtgatcgactttaccattcacaaggggacacagtg
gttggataccaacccccggtattccccttttccagggatgggtcacgtgtgggtcatcgg
cctgaggcgcaagttcaaccacgacgacaaatgggggccaaaggttcagggatgtaccaa
caacagcagcatctgcaacatgctcaccaaccaacctcaaccagcagaccattgcaacca
caaatttctgcacagataccaaactaccaaccaccatccgtaccatctcctcatcgccct
caagtgaacaacccatatgctcgcccaatgcaacagccaagttattctggtcctcaagct
ccgagcaacatcttcactcctccatctgttgccccaacatctcaggtgacggggatgatg
ccggttcaggccccatctgccccataccaaccctacatggcccccaccccacaaaccatg
tcccaatcaatgggtaatccccctcagccccccagcaacatgtacgctccagatatggag
aagaaacacaacagtggaggttggaatgatcctcctgctcttgatcctaacagagtacca
aagaagaaaaagccgacaactgtccagtcgccacccgttgctaatttccttgtccctagc
cagccggcaattccccatgatgtttataaacagccaacccccaaacccattgaccccgct
cagctgaacctgatgaccccggctgccccggtacataaccccatgggtaacatgatgcga
ccaggggtttcccctatgatgggtggggtccagccaagcaacaacatgatgcaaaatgtg
ccgcccccacctccgatggctactaattattatgctgaggaaagagatgaactggatcac
tcttttagtgatgatgagagctctgcacccgccccatctgtaccaaccggtgcattgaaa
gacacaccaaaatctcccatccctgccgaacatcaaatacttcaagtccaatttgatcag
ctgattaaaaaggcgctcaaccagaatcccaatcagcaaataaaacggaaactggatgat
tgttccagaagactggagttcctctacgacaagcttcgtgcaaactcgctttccccgaac
atcatcggagggttgcatcaggtcgcccaaagcatggaatcacgtgattacgccaatggt
ttgcgtcaccatacccgcattgtgacgcaatcgaacttctccgagatctccgcgttcatg
cctggcctcaaatccttgcttcaaatcgctggccagcttcggatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (138)   
   KEGG ORTHOLOGY (1)   
   RefGene (133)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (164)   

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