KEGG T01056: 100186062

Ciona intestinalis (sea squirt): 100186062

Entry

100186062 CDS T01056

Definition

gamma-aminobutyric acid receptor subunit beta-3-like

Orthology

K05181

gamma-aminobutyric acid receptor subunit beta

Organism

cin Ciona intestinalis (sea squirt)

Pathway

cin04080

Neuroactive ligand-receptor interaction

Class

Environmental Information Processing; Signaling molecules and interaction; Neuroactive ligand-receptor interaction [PATH:cin04080]

SSDB

Motif

Pfam:

Neur_chan_LBD Neur_chan_memb UPF0640 YebO

Other DBs

NCBI-GI:

198420848

NCBI-GeneID:

100186062

Position

AA seq 499 aa
MGCLVQFLIIFFIQRISAISNERQAIIKSTLDRLLEEDYDIRLRPQYGADPLSVGMSIQV
ASIDSVSEVNMDYTLTLNFQQSWRDERLAFDGLNLNLTLDNRVVDKIWVPDTYFVNDKKS
YIHTVTRSNKMLRIEEDGTIFYGLRVTTDLACMMNLRRYPMDEQNCTLEIESYGYTTDDI
RFHMLGDIGVTGVENLKLAQFKVTNSRLLIKNITFATGSYPRVSLSFLLKRNIGFFILQT
YLPCSLITILSWVSFWINHEATAARVALGITTVLTVTTISTNVRQSLPKIPDIKALDVYL
ICCFVFVFLALLEYAMVNCTYYGNMARQTKAKLRRKLTEALEAEESAKSANFAAQFSGGS
KETIRYCDEESTSPGSIHQIAAGWSDNEENAIRHISTCPHANHARPLPTRRRNVGFNVAT
QGRARGMHNAANGKRRGQPSRNSVGKKRKGYASRAKKSLSALKVPKISDVSIIDKVARVA
FPASFAIFNFVYWTYYIFF

NT seq 1500 nt +upstreamnt +downstreamnt
atgggatgtttagttcagtttttaattatattctttatacaaagaatttctgccatctct
aatgaacgacaagcaatcattaaaagtacattggatcgtttattagaggaagattacgat
attcggttacgtccacaatatggcgccgatccgctgtcagttgggatgagcattcaagtt
gccagcattgacagtgtgtcagaagttaacatggattatacattgacgcttaacttccaa
caatcgtggagggacgagcgccttgcgtttgatggacttaacctaaatctaacattggac
aacagggtagtggacaaaatatgggtaccggacacctactttgttaacgacaagaagtct
tatatccacacggttacgagaagcaataagatgttacgtattgaagaagatgggacgata
ttttacgggctcagagtgacaacagacctagcgtgtatgatgaacttgagacgttatcca
atggacgaacagaactgcacgcttgagattgagagctacggttatacaactgatgatatt
cgtttccatatgctgggggacattggggtgacgggagttgaaaacttgaagctggctcaa
ttcaaagtcacaaactccaggcttttgataaaaaacattacttttgctacaggatcttat
ccacgagtgtcgttaagttttctcttgaaacgaaacattggtttctttatattgcaaaca
tacctaccatgctcgcttattacaattctgagttgggtttcattttggatcaaccacgaa
gcgacggccgctcgcgttgcgttgggtattaccaccgtgcttactgtgacaacaatcagt
acaaacgttcggcaatctcttccaaagatccccgacatcaaagcgcttgatgtttatctg
atttgttgttttgtcttcgtgttcctcgccctgctggaatacgcgatggtcaattgtacg
tattacggcaacatggcccgacagacgaaggcaaaacttcggcggaagcttacagaagcc
ctcgaggcagaagaatcagcaaaatctgcgaacttcgccgcccaatttagtggaggttca
aaagaaacaatacgttattgtgacgaagagtccacgtcgccgggttcaattcaccagata
gctgccgggtggtcggacaatgaggaaaatgcgatccgacatatttctacttgtccacat
gcaaatcacgcgcgccctctaccgacaagacgtaggaacgtgggatttaatgtcgcgaca
cagggccgggcacgcggtatgcacaacgccgcgaatggcaaacgtagagggcagccaagc
aggaactccgttggaaagaaaagaaagggttacgcatctcgggcaaagaaatctctgtcg
gctttgaaagttcctaagataagcgacgtcagcattatagacaaagtggcaagagtggcg
ttcccagcgtctttcgcaatttttaactttgtctactggacctactacattttcttttga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF

DBGET integrated database retrieval system