KEGG   Ciona intestinalis (yellow sea squirt): 445807
Entry
445807            CDS       T01056                                 
Symbol
hox4
Name
(RefSeq) hox4 protein
  KO
K09304  homeobox protein HoxA/B/C/D4
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cin03000]
    445807 (hox4)
Transcription factors [BR:cin03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    445807 (hox4)
SSDB
Motif
Pfam: Homeodomain RAM Homeobox_KN DUF2209
Other DBs
NCBI-GeneID: 445807
NCBI-ProteinID: NP_001027781
UniProt: Q4H3C6
Position
1:complement(9924113..9941672)
AA seq 335 aa
MSIIDQTELDFHNRGYVTNGIIKDRDVIDQGLPFFPTHHESAAALNLADMHGRGKEQAIS
SSKSSPEDDKTDEEYQAMGSRRSSNGPPVVYPWMKRIHVSQVINGLESGKRPRTAYTRHQ
VLELEKEFHYNRYLTRRRRIEIAHGLCLSERQVKIWFQNRRMKWKKDHKLPNTKVRNPPT
SSLPILPTPSPPMTSLNHMLPNLSLPGSQSSPHNYDKSPPMTPTGGEYPIPNHALMHQPM
TSRELNDAIGDSPTTEASYKSHDRRELDAMTSFQECNPPRNDHHPLMFDATGIPHSTFYG
GVMSIPNSWNGDHSRAYISANQNSPYPSYPLSTFQ
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgtcaataattgatcaaacggaattggatttccacaaccgtggatacgtcacaaacggc
attatcaaggaccgtgatgtcatagaccaagggttgccatttttccccacccatcatgaa
tcggcagcggccttgaacttggccgatatgcacggccgtgggaaagaacaggcgatctct
tccagtaagtcgagtccggaggatgacaagacagatgaagaatatcaagcaatgggaagc
aggagaagcagcaacgggcctcccgttgtttatccttggatgaaaaggattcatgtcagt
caagtgataaacgggttggagtcgggtaagagaccaagaaccgcttacacgcgacaccag
gtacttgaactggaaaaggaattccattataatagataccttacaagaagaagacgaata
gagattgctcatggtctctgcctaagtgaaagacaggttaagatttggttccaaaaccgt
cgaatgaaatggaaaaaagatcacaagctgcccaacactaaagtgaggaacccacctacg
tcatcactgcctattctcccgacacccagtcctcctatgacgtcactgaaccatatgtta
cctaacttatcgctgccagggagtcaaagttcaccccataattatgataagagtccccct
atgactcctacaggaggggaatacccgatacccaaccacgcgttgatgcaccagccgatg
acgtcacgagagttgaatgacgcaattggggattccccaacgacggaagcgagttacaaa
agccacgatcgaagggagttagacgcgatgacttctttccaagaatgcaacccaccacgc
aacgaccatcaccctcttatgtttgacgccacgggtattccacactctactttctacggc
ggtgtgatgagcattcccaattcgtggaacggtgatcactcacgtgcttatatatcagcc
aatcagaactctccctacccctcctaccctctgtcgaccttccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (13)   
   RefSeq(nuc) (5)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (44)   

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