KEGG   Ciona intestinalis (yellow sea squirt): 778744
Entry
778744            CDS       T01056                                 
Name
(RefSeq) uncharacterized protein LOC778744
Organism
cin  Ciona intestinalis (yellow sea squirt)
SSDB
Motif
Pfam: DTC Macro zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-HC5HC2H_2 zf-ANAPC11 zf-RING_16 zf-P11 zf-RING_4 Vps39_2
Other DBs
NCBI-GeneID: 778744
NCBI-ProteinID: XP_026691658
Position
9:1645849..1659726
AA seq 1348 aa
MIDQFNKDQKLYCGQRANKPNLLVFICKKEDLEKFVHAYKDFKQICEKYEGSMKLVSRSN
SLPNQTSAGNAPTLKLKTTDAQSDSSGSKKKNKNAATTKQNADHYEDEACNANAPTLKLN
KAPKKTDAKSDSSESKKKNGNDTTTKQNADHYEYEASIVAGRTSVENGHENYGTTGNNSE
NTRSMISSGEFKEDNEPKRNGGDNIEVNQEKHSNSDLTPKKDGSTKTNQEKDNNTETNQV
EVGNTELNQEEVGNTKVNQEKHGNTKTNQEKDGNTETNQEKHSNSDLTPKKNGNTESNQE
KVGSTDLNIDIVDGGKSNLNKKVVKPQLPATVDENLKNDDFALQSTDVLMTLNEYEVGVV
TFWESCQQLPSLWSKHDVQLLSSKNGNQTIKISSKNAIEFMQEFQSLYNDAKLKMQHKFV
QVSKESKKIKKQLKLLNDTCKLAHCAFYYDAPNLMVVMGSDIAMLDHCHSQLQSQKYTNA
NPTQSLGTQVSSDSQVPIVYPSHSGKTIQRGDSKDTTKSYEPNNYSDCSSNDTSNPKPVV
VQQNKESKVEPTQHKQQNATELPSNISVHRAVEKEYTDTITVDKDVYSYIQLSKANRVKQ
IWERHQIKIKTTKVGQDNLSIELTSKYDERIVQAIDEFQRLYQDTMDHIQQANIECEFDS
LDDIEKAVNVVRANNKDVLVCQSSDNNHRVIMLSEDKEALKASKRVFQDCLNSISDKPTQ
LPKQPSLASRDNYIEVFKFVTKGGISVSVGNGNIALQDVDAIVNAANKYIENGAGVTGAI
FRQGGWEFEQVCQKAMKRRHRPLAVGEVVSVKAAGRLQCKKVLHLVGPQWYKYSNKQEAY
QLLESGLLSVLEESDCCGVFTLALPPVATVVYGTPLNAFVQAMNTALTCFETSYPRSTRV
LNYIRILSIDQSTVSILATMFSSSVKKDRSSSVDPSSHHHHTSAQPLGGNDEDIDGGEVP
MEIDDVYDGHSSYKYQSNAQQSQQSTSQVTEKKSYAAAAKSSSHDTRAVSNIYENKVQLK
QQTDEWKMTAEIFPQTASTEYMYHLHISIPSLHYQDMYRKTAYIPNVEGAREVIKRIGKL
VKAKKLFQLKYSADPVCSCKLKSLAFNMFDIKENYMENLQNELLELEKKEYQKPTEKDSE
KGKNGKKEQENGKGKESNTEEDEKEQCAICLDDINGSKIKTLPCKHKFHETCVNQALKVN
NLCPICKQAVGKVKGNQPNGTMRDRIDHNTHLPGYERYGAIVIDYNFPSGIQGREHPNPG
VRYTGTSRTAYLPDNREGREVLRLLKKAFDARLIFTIGRSVTTGMENQVTWNDIHHKTNP
YGGATGFGYPDPDYLNRVKDELKAKGIQ
NT seq 4047 nt   +upstreamnt  +downstreamnt
atgattgatcagtttaataaagatcaaaaactttattgtggtcagcgggcaaataaacct
aatcttttggtgtttatttgtaaaaaagaagatttggagaaatttgtgcatgcatacaaa
gacttcaaacagatatgtgagaaatatgaaggttcaatgaagcttgtttcaaggtcgaat
tccctaccaaaccaaacttccgcaggaaatgctccaacactaaagctaaagactactgat
gctcaatcggattcctctggaagtaagaaaaagaataaaaatgctgcaacaacaaaacag
aatgctgatcattatgaagatgaagcctgtaacgcaaatgctccaacactaaagcttaac
aaagcaccaaagaaaactgatgctaaatctgattcttctgaaagtaagaaaaagaatgga
aatgatacaacaacaaaacagaatgctgatcattatgaatatgaagcctctattgttgca
gggagaacaagtgtcgaaaatggtcatgaaaactatggcacgactggcaataacagtgaa
aatacaagaagcatgatttcctctggagaatttaaagaagacaatgaaccaaaaagaaat
ggtggtgacaacattgaagtaaaccaagaaaaacacagcaactcagatttaacccccaaa
aaggatggcagcactaaaacaaaccaagaaaaggacaacaacactgaaacaaaccaagta
gaagttggcaacactgaattaaaccaagaagaagttggcaacactaaagtaaaccaagaa
aaacatggtaacactaaaacaaaccaggagaaggacggcaacactgaaacaaaccaagaa
aaacatagcaactcagatttaaccccaaaaaagaatggcaacactgaatcaaatcaagaa
aaagttggcagcactgatttgaatatagatatagtggatggaggaaaatcaaacctcaat
aaaaaagttgtgaaaccacaattgccagcaacagtagatgaaaatttaaaaaatgatgat
tttgcattgcaaagtacagatgtgttgatgacattgaatgaatatgaagttggagtcgta
actttctgggaatcgtgtcaacagttgccatctctttggtcaaaacatgatgttcagctc
ctttcttccaagaatggaaatcaaaccatcaaaatatcctcaaagaatgcgattgaattc
atgcaagaatttcagtctctttacaatgatgcaaaacttaaaatgcaacataaatttgtg
caagtttccaaagaatcgaaaaaaataaagaaacagttgaaactattaaatgatacgtgc
aaactggcgcactgtgcattttattacgatgcacctaacttaatggtggtcatgggatca
gatattgcaatgttggatcactgtcacagtcaactacaaagtcaaaaatacacaaatgca
aatccaactcaaagtcttggcacccaggtttcatctgatagccaagttccaattgtctat
ccaagtcattcaggtaaaacaattcaaagaggcgatagtaaagatacaacaaaatcttat
gaacccaacaactattccgattgttccagtaatgatacttcgaatccaaaaccagttgtg
gttcaacaaaacaaagaaagtaaagtggagccaacacaacataaacaacaaaatgcaaca
gaactgccaagcaatataagtgtgcatagggctgtagagaaagagtataccgataccatc
actgtggataaagatgtttatagctacattcaactttcaaaggccaaccgtgttaagcag
atatgggagagacatcagatcaagatcaaaacaacaaaagttggccaagataatttatcc
attgagttaacttctaagtatgatgaaaggattgtccaagcaattgatgaatttcaaaga
ttataccaagataccatggatcatatacaacaagcgaacatagaatgtgaatttgattca
cttgatgacattgaaaaagcagttaatgttgtaagagctaacaacaaagatgtgttggtc
tgtcaatcttctgataacaaccatagagttattatgctgtcagaagacaaggaagctttg
aaagccagtaaacgtgttttccaagattgcttgaattctataagtgacaaacccacccaa
ctacctaaacaaccatccttagcaagtcgtgataattacatagaggttttcaagttcgtt
actaaaggtggcatcagtgtatctgttggtaatggcaacatagcacttcaagatgtagat
gcaattgtcaatgctgccaataaatacattgaaaacggtgctggagtcactggagctata
ttcaggcaagggggttgggagtttgaacaagtgtgtcagaaagcaatgaagcgtaggcat
cgaccgttagctgttggagaagtggtttctgtcaaggccgccggccgcttgcaatgtaaa
aaggttttgcacctggttggacctcagtggtacaaatattctaacaaacaagaagcatat
cagttacttgaaagtggtttattatcagtgttagaggaatctgattgttgtggtgtattc
acacttgctcttccacctgtagctacagttgtttatggaactccactcaatgcctttgta
caagccatgaatacagcactgacatgctttgagaccagttaccctcgtagcacacgcgtt
cttaactacataagaattctttcaattgaccaatcgactgtatctattttggcaaccatg
ttttcttcttcagttaaaaaggatcggtcttcatctgttgacccttcatcccatcatcac
catacaagtgcacaaccattgggtggcaatgatgaggatattgatggaggtgaagttcca
atggagattgatgatgtgtatgatggtcacagtagttataagtatcagagtaacgcgcaa
caatctcagcaaagcaccagtcaagtcactgaaaaaaaaagttatgctgcagctgccaag
tcttcctcacatgatacaagagctgtgtcaaacatatatgaaaataaagttcaattgaaa
caacaaacagatgaatggaaaatgaccgctgaaatctttccccaaactgcatcaacagag
tacatgtatcatttacacatcagcattccatctcttcactatcaggacatgtacaggaaa
acagcttatattcccaatgtggaaggagctcgtgaagtaatcaaaagaattggaaaactt
gtaaaggcgaaaaagttgtttcagcttaaatattcagcagacccagtgtgtagctgcaag
cttaaaagtttagcatttaacatgtttgacattaaagaaaactacatggagaatttacaa
aatgaattgttagagttggaaaagaaggaatatcagaaaccaacagaaaaagatagtgaa
aagggaaagaatggtaaaaaagagcaagagaatgggaaaggtaaggagagtaacactgaa
gaggatgaaaaagaacagtgtgccatttgtttggatgatattaatggttcaaaaataaag
acacttccatgcaaacataaatttcatgaaacttgtgtcaaccaagcattgaaggtcaac
aacctttgcccaatatgtaaacaagctgtggggaaagtaaagggcaaccaacccaatgga
acaatgagggatcgtattgaccataacacccatcttcctggatatgaacgttatggtgct
attgtgattgattacaattttccaagtggaatacaaggacgcgaacatcccaaccctgga
gtacgatatactggtacaagcaggacagcttatctgccagataatagagaaggaagggaa
gtgttgagattgctgaagaaagcttttgatgctcgtttaattttcacaattggaagatca
gtaacaactggaatggaaaaccaagttacatggaatgatattcatcataaaactaatcct
tatggtggtgcaactgggtttggatatccagatcctgattatctaaacagagtgaaagat
gaacttaaagcaaaaggaattcaataa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (82)   
   RefGene (79)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (16)   
   Pfam (16)   
All databases (105)   

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