KEGG   Ciona intestinalis (yellow sea squirt): 778899
Entry
778899            CDS       T01056                                 
Symbol
foxp
Name
(RefSeq) transcription factor protein
  KO
K09409  forkhead box protein P2/4
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cin03000]
    778899 (foxp)
Transcription factors [BR:cin03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix other regulators
    778899 (foxp)
SSDB
Motif
Pfam: FOXP-CC Forkhead
Other DBs
NCBI-GeneID: 778899
NCBI-ProteinID: NP_001071939
Ensembl: ENSCING00000012009
UniProt: Q4H3H6
Position
7:complement(1438101..1460927)
AA seq 746 aa
MRKAVHESSEPLISENQPSEARSNHTPEQSARNLPAGIDNELLQSIALYGRLAKDTRTNN
NSNNNSKRQYSGNSPQSRSKSPRLDQSPRADYNKESEGQLGVLELAALQRQAMQLAFLQQ
STFKNQDKSDLPSSPEEDGNNMSVAAGYKNPMAVAMAAGVLPATSSAQQMQQLLSQQVLS
PQHLQAIMQQQAYSAQHHQAQIHEFYRQQQKQVQDFQIQLAAAKQQQKGEVNDVTSHHSN
GAKLSNEQQLQQHLALQQLVHLQQMQQQQQQAAAAALQQHGLATAVAMAQGRHGNGNQAD
MSPSDIQQLILKHVAETATPKKETPMTSQMQSDKPISSIRSRDHSFNGETPNMRRISSSK
SPRENSPDPPPAPQPLFAHGVCKWPGCDVECPDIHTFHRHLNRSHSLDDKSTAQCRVQMQ
VVEQLEKQLNQERERLDAMTQHLSGKEQKLETRDERVAMDTTGMTNGKAEPLEMRHQSLP
GPNNNNNSHHGMALAPFPAHPVTSRTPSTISLPSSPISAPHLGAFPSTLFPPATSVPSSP
PLFNYLTNSMTSGSRDAMSQASKRRHSAAVPISTDLSQNQEFYRNADVRPPFTYASLIRQ
AVLEAPDHQMTLNEIYNWFQKKFAYFRRNAPTWKNAVRHNLSLHKCFVRVENVKGAVWTV
DENEYQKRRPQKFSGSPAIRNRIETPSSASFYSNPAMNLATMQMALGENPFNQAQLVSQA
AMFGGTPSPYGAFFTQRVHTWPQYVC
NT seq 2241 nt   +upstreamnt  +downstreamnt
atgcgcaaggctgtccacgaaagctcagagccgctcatttcagaaaatcaacccagcgag
gctcggtcaaaccatacgccggaacaaagtgcccgaaacctgcccgccggaattgacaac
gaattgttgcagagcatagcattgtacggtcggctggccaaggatacacggacaaacaac
aactcgaacaataacagcaagcgacagtactctgggaattccccgcagtcgagaagcaaa
agtcctcgcctggatcaaagtcctagagcggattacaataaggagagtgagggtcagctg
ggagttttggagctggcagcgctacaacgacaggcaatgcaacttgccttcttacaacag
tccaccttcaaaaatcaggacaagtcagatcttccttctagcccagaagaggacggtaac
aacatgtccgttgcggctggctataaaaatcccatggcggttgccatggcagcaggggtc
ctcccagctacgtcatcagcgcaacagatgcagcagttgctttcccagcaagtattatcc
ccgcagcatctgcaagctataatgcaacaacaagcctactcagcccagcaccaccaggcg
cagatccacgaattttaccggcaacagcaaaaacaagtccaggactttcaaatccagctg
gccgccgccaagcagcagcaaaaaggcgaggtgaatgacgtcacgagtcaccatagcaac
ggcgcaaagctgagcaacgagcaacaacttcaacagcatcttgcgctacagcaactggtt
catctccagcaaatgcagcagcaacagcaacaagcagcagcagcggcattacagcaacat
ggcctagcaaccgctgtagcaatggcccaaggccgccatggcaacgggaaccaagcagac
atgtcaccaagcgacattcagcagcttatattaaagcacgttgctgaaaccgccaccccg
aagaaagaaacacctatgacgtcacaaatgcagtcggacaagccgatttcctccatccgg
tcacgtgatcactcatttaacggggaaacaccgaatatgagaagaatctctagctcgaag
tcacccagagaaaattccccggaccccccaccagctccccaacccctatttgctcatggg
gtttgcaagtggcctgggtgtgacgttgaatgcccggacatacacacctttcaccgtcat
ctcaatcgttcccatagtctggacgacaaaagtacagcacagtgccgtgtgcaaatgcag
gtcgtggagcaattggaaaagcagctcaaccaggagcgtgaacgattggatgcaatgact
caacacctcagcgggaaagaacaaaagcttgagacacgtgacgaacgagttgccatggat
actacaggaatgaccaatggaaaagcggaacctttggaaatgcgacatcagtcactaccg
ggtcccaacaacaacaacaacagtcatcacgggatggcgctcgcaccctttcccgcccac
ccagtgacgtcacgcacccctagtaccatcagcctcccatcgagccccatctcggccccc
catttaggtgctttcccttcgaccctatttcctccagcgacgtctgtcccatcttcccca
cctctgttcaactatttgacgaacagtatgacgtcgggatcacgtgacgcaatgtcccaa
gcctcgaaacgacgtcactcggctgctgtgcccatatcgacagatctctcccagaatcag
gagttctacagaaacgctgacgtcagaccccccttcacctacgcctcactgatacgacag
gctgttttggaggcgcccgaccaccagatgacgctaaacgagatctacaactggtttcag
aaaaagttcgcttattttagaagaaatgccccaacatggaagaacgctgtgagacacaat
ttgagtctgcacaagtgctttgtgcgcgttgagaacgtaaaaggagcggtctggaccgtc
gatgagaacgaataccagaagaggagaccccagaagttctccgggagtccagcaattcgc
aaccgtatcgaaactccgtcatctgctagtttctatagcaacccagcaatgaaccttgca
accatgcagatggctctaggtgaaaaccctttcaaccaagcacagcttgtaagtcaggca
gcaatgtttggtggaacccctagcccttacggagctttttttacccagcgggttcacact
tggccacagtatgtctgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (77)   

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