KEGG T01056: 778999

Ciona intestinalis (sea squirt): 778999

Entry

778999 CDS T01056

Gene name

zf(ring)-22

Definition

zinc finger protein

Orthology

K04725

E3 ubiquitin-protein ligase XIAP

Organism

cin Ciona intestinalis (sea squirt)

Pathway

cin04120

Ubiquitin mediated proteolysis

Class

Genetic Information Processing; Folding, sorting and degradation; Ubiquitin mediated proteolysis [PATH:cin04120]

SSDB

Motif

Pfam:

BIR zf-C3HC4_3 Prok-RING_4

Other DBs

NCBI-GI:

118344396

NCBI-GeneID:

778999

UniProt:

Q1RPV4

Position

AA seq 612 aa
MLVDSFCSNLKYQTMFHNIDRVSQHAAAMDYSSKSNRIQSLENFPSAPVNPIQLAIHGFY
FTGVEDCVVCFSCKNSVRNWKLGDKEGDKKWHKPDCVFFNSLSQTAPMEVSTTTANLSTN
ANSPMESLSNEPSVSGLFHNRNINTSQQPNQNEALLIDIGNNEGTTNANPVNDTNISTPN
HQDMNHFVNTNPTEFTSFLEYLDLSKEVDRKRTFDYWPHQLREVNTAALAKYGFYYLGIS
DMVECFCCSNVLGNWNVDDNPKNRHLERFPNCRFIQNFTRRIPRQEPNVQPQVHGVRPRL
QQQVNQEVHQHPHLLHPHNAHMRSLEQRRSSFRGFSPRHHLRATIDEIAEAGFYFLGPGD
LVKCWYCGNKLKNFDVEDEPWMEHAKWFPQCEFLLQNKGHAFVANIQTSYPRNVHVVNLP
SVESGPTFLPSPIQNHETLATQQRQLLEEGMTQDYVQQAVEIFGLVAVERVMKRLIESSG
CYYQTSEGLINAVLESSETTTTTTTNTQDTFTPTQSGHYFFPVDSDVRIPVQLTNFIQPS
IPMHGTDNSDNISSGQSNSNSQLCCKVCLNRDATIAFNPCGHLCVCQSCSPRLNACPICR
RPIQQKIRIYFP

NT seq 1839 nt +upstreamnt +downstreamnt
atgctcgtggattcattttgctccaacttgaaatatcaaactatgtttcataatatagat
agagttagccagcatgctgcggccatggattattcaagcaaatctaacagaatacaatca
cttgaaaactttccctcagccccagttaacccaatccaacttgcaattcatgggttttat
ttcactggtgttgaagactgtgtggtttgcttcagttgtaagaacagcgttcgtaattgg
aagcttggtgacaaagagggagacaagaaatggcacaaaccagattgtgtgtttttcaac
tcattgtcgcaaactgctcccatggaagtatccactacaacagctaacttatccaccaat
gcaaattctcccatggaaagtttatctaatgaaccttctgtgtctggtttatttcacaat
agaaatataaacacatcacaacaacctaatcaaaatgaagcccttttgattgacattgga
aataatgagggaactacaaatgcaaacccagtaaatgacaccaacatttcaacaccaaat
catcaagatatgaatcattttgtcaacaccaatcccactgagttcacaagctttttggaa
tatttggatttaagcaaagaagtcgacagaaaacgaacatttgattactggccccaccag
ctacgtgaggtcaacacggcagctttggctaaatatggtttctattatctcggcataagt
gatatggttgagtgcttctgttgttctaatgtgcttggtaactggaatgtggacgacaat
ccgaaaaatcgacatttggaaagatttccgaattgcagatttattcaaaattttacccga
agaattccacgtcaagaaccaaacgttcaaccccaagttcatggtgtgcgaccaaggtta
caacaacaagtaaatcaagaagttcatcagcatccccacctcctgcatccacacaatgct
cacatgaggtctttggagcaacgaagatcatcttttagaggtttctcaccccggcaccac
ctgagagccaccattgatgaaattgcagaagctggattttattttctcggtccaggtgac
ttagtaaaatgttggtattgtggaaataaattaaaaaactttgatgtggaagatgaacct
tggatggaacatgcaaagtggtttccacaatgtgagtttctcctacaaaataaaggccat
gcatttgttgccaacatacaaacaagttacccacgtaatgtacacgtggttaacttacct
tctgtggaaagcggtccaacatttctaccatcacctatacagaaccatgaaacattggct
actcaacagcgccaactactggaagaaggaatgacgcaagattacgtccaacaagccgtg
gaaatatttggtttggtggcggtagagagagtcatgaaaagattgattgaatcaagtgga
tgttattaccaaacaagtgaaggattaattaacgctgtacttgaaagcagtgaaacaaca
acaacaacaacaactaatacgcaagatacattcactccaacacagagtgggcattatttc
tttcctgtggatagcgacgttaggatccctgtccagctcaccaacttcattcaaccatct
ataccaatgcatggcactgataacagtgacaacatttctagcggacaaagtaactccaac
tcacaattatgttgcaaagtttgcttgaacagagatgcaactattgcatttaacccatgt
ggacacctatgtgtgtgccaaagctgttccccacgtttgaatgcatgtcccatatgcaga
agaccaatccagcaaaagattcgaatttattttccatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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