KEGG   Citrus sinensis (Valencia orange): 102620413
Entry
102620413         CDS       T02983                                 
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102620413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102620413
   03110 Chaperones and folding catalysts [BR:cit03110]
    102620413
   03029 Mitochondrial biogenesis [BR:cit03029]
    102620413
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102620413
Enzymes [BR:cit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     102620413
Messenger RNA biogenesis [BR:cit03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     102620413
Chaperones and folding catalysts [BR:cit03110]
 Heat shock proteins
  HSP60 / Chaperonin
   102620413
Mitochondrial biogenesis [BR:cit03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    102620413
Exosome [BR:cit04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102620413
  Exosomal proteins of other body fluids (saliva and urine)
   102620413
  Exosomal proteins of breast cancer cells
   102620413
  Exosomal proteins of colorectal cancer cells
   102620413
  Exosomal proteins of bladder cancer cells
   102620413
SSDB
Motif
Pfam: Cpn60_TCP1 ChlI Flavoprotein
Other DBs
NCBI-GeneID: 102620413
NCBI-ProteinID: XP_006492150
Position
9:complement(join(21440907..21441021,21441152..21441230,21441315..21441420,21441658..21441761,21441858..21441957,21442157..21442252,21442405..21442482,21442705..21442773,21442864..21442944,21443057..21443146,21443257..21443343,21443421..21443525,21443764..21443859,21443962..21444137,21444267..21444426,21444675..21444806,21445131..21445155,21445303..21445340))
AA seq 578 aa
MYRFASSLASKARIARNSTQQIGNRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDD
TVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELEKLSTANFDQKIGVQIIQNALKT
PVHTIAANAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVVELPKEEKEAPGGMGGMGGMGGMDY
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgtatcgtttcgcttcaagcctcgcttccaaagcaaggatcgctaggaacagtacccag
cagattggaaatagattgagttggtccagaaactatgctgccaaagacattagatttggg
gttgaagctcgagctttgatgctgaagggtgttgaagagctcgccgatgcggtcaaagtc
accatgggacctaaggggcgtaatgtggtcattgaacaaagctggggtgctcccaaggtg
acaaaagatggtgttactgttgcaaagagcattgaattcaaagataaagtcaagaacatt
ggtgctagccttgtgaagcaagttgctaatgccaccaatgatgttgctggtgatggaact
acctgtgcaacagttcttacccgagcaatatttacagaaggctgcaagtcagttgctgcg
ggtatgaacgcaatggatcttcgacgtggtatcactatggcagttgatgccgtggtaact
aacttgaaaagcagagccagaatgatcagcacatctgaggagatagcacaggtggggaca
atatcagcaaatggagagagagaaattggcgagttaattgcaaaggccatggagaaggtc
ggcaaagaaggagtaatcaccatacaagatgggaagacattatataatgagttggaagtt
gttgaaggaatgaagcttgacaggggttatatatctccttatttcataaccaaccagaaa
aatcaaaaatgtgaattagaagatcctctcattcttgtccacgagaagaaaatctcaaat
ctaactgctgttgtgagggtattagagctggcattgaagagacaaaggcccttattgatt
gttgctgaagatgttgaaagtgaagcgctagcgactcttattttgaataagcttcgcgct
ggaatcaaggtatgtgccatcaaggcccctgggtttggagagaacaggaaggccaatatg
caggatctggctgttctcactggtggtgatctgataactgaagagctcggcatggacctt
gagaaagtgaatctggatatgctcggcacttgcaaaaaggttacaatatcgaaggatgac
actgtcattctggacggtgctggtgataagaagtccattgaagaaagatgtgaacagatt
aggtctgcgattgagaacagcacttctgattatgacaaggagaagttgcaagaaagattg
gcaaagctttctggtggtgttgctgtgttgaagattggaggagctagtgaagctgaagtt
ggtgagaagaaagatagagttactgatgctttgaatgcgacgaaggcagctgtagaagag
ggtattgtgccaggtggtggtgttgcccttctatatgcggcaaaagagttggaaaagctg
tccactgctaactttgaccagaagattggtgttcagattattcagaatgctctaaagaca
ccagtgcacacaattgctgctaatgcaggagttgagggggctgttgtggttggtaagcta
ttggagcaggacaacactgaccttgggtatgatgccgccaaaggtgagtatgttgatatg
gtcaagtctggaattattgatccattgaaagtaatcagaactgctttggttgatgctgca
agtgtatcatctttaatgaccacaactgaagctattgttgttgagctgcctaaggaggag
aaggaagctccgggaggcatgggtggcatgggcggaatgggcggcatggactattga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (100)   
   KEGG ORTHOLOGY (1)   
   RefGene (96)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (114)   

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