KEGG   Citrus sinensis (Valencia orange): 102622384
Entry
102622384         CDS       T02983                                 
Name
(RefSeq) cullin-3A
  KO
K03869  cullin 3
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102622384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cit04121]
    102622384
   03400 DNA repair and recombination proteins [BR:cit03400]
    102622384
Ubiquitin system [BR:cit04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Cullin
     102622384
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     102622384
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DNA_repr_REX1B HTH_IclR
Other DBs
NCBI-GeneID: 102622384
NCBI-ProteinID: XP_006483176
Position
4:join(27857272..27857432,27858244..27860281)
AA seq 732 aa
MSNQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYM
DRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI
IKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT
HYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSG
LLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA
LNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYA
SHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTN
MGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSL
ACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVE
EDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLER
DNVDRKLYRYLA
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagtaatcagaagaagaggaactttcaaattgaggctttcaagcatcgagtcgtagtg
gatccgaaatacgcagagaagacgtggaagattctggagcatgcgattcacgagatttat
aatcacaatgctagtggcctcagttttgaagagctttacagaaatgcctacaatatggtg
ctgcacaaatttggtgaaaagttgtactccggacttgtttcgaccatgactttgcatctg
aaggaaatatcaaaatcgattgaagctgctcagggaggttcgtttctggaagagctgaac
aggaaatggaatgaccataataaggcattgcaaatgatccgagacatattgatgtacatg
gacaggacttatattccaagtacgcataaaacccctgttcatgagcttggactgaatctg
tggagggataacattgtgcgctccaacaaaattcagacgagacttttgaatacacttctt
gaacttgttcacagagaaaggactggtgaagttataaatagggggttgatgaggaatata
attaagatgctaatggatttaggtccctctgtttaccaagaagattttgagaaaccattt
cttgaggtgtctgccgagttttataaggttgaatctcagaagtttatcgagtgttgtgac
tgtggggaatatctgaagaaagcagagagacgtctaaatgaagaaatggagagagtgacc
cactacttggatgccaagagtgaagccaagattactaatgtggtggagaaagagatgatt
gcaaaccacatgccaagactagttcacatggataattcaggtttggtaaatatgctcctg
gatgataaatatgaagatttgggaagaatgtacaacttattccgtagggttcccagtggt
ctcttaacaatacgagaagtcatgacatctcatcttagggagactggtaagcagctagtt
actgatccagaaagattgaaggatccggttgaatttgtgcagcggctgttggatgaaaag
gacaaatacgataatattattagttcagcgttcaacaatgacaagacattccagaatgct
ttaaattcctcttttgaatatttcattaatttgaatccgcgttcaccagagttcatatca
ttgtttgtggatgataaacttcgcaaaggtctgaaaggagttagcgaggaggatgtggag
actattctagacaaagtaatgatgctgttccgctacttgcaggagaaagatgtatttgaa
aagtactacaagcaacatttagctaagcggcttttgtcaggaaaaactgtctctgatgat
gcagagagaagtctcatagtcaagctgaagactgaatgtggttaccaatttacttcaaaa
ttagaaggcatgtttacagacatgaagacctcccaagatacaatgcacgaattttatgca
agccatcctgagctaggggacagccgcacactggttgtccaggttttgacaactggatct
tggcccacccagcctagtgttacttgcaacctgccagccgaaatgtcagctctgtgtgag
aaatttagatcatactaccttggaactcatactggtcggagattgtcctggcaaaccaac
atgggctcagcagatataaaggcaacctttggtaaaggtcagaagcatgagctgaatgtc
tccacataccaaatgtgtgttctcatgctgtttaacaacgctgatcggcttagctaccgg
gaaatagagcaggcaacagagattcctgcttcagacttgaaaaggtgcctgcaatctctg
gcttgtgtgagggggaagaatgttcttcggaaagaacccatgagtaaagacattggtgaa
gatgatgcattctttgtcaatgacaagttcacgagcaaattctataaggtaaagatagga
actgtggttgcacaaaaggagtcagaaccagagaaacaggaaactcggcaaagagtggag
gaggacaggaagcctcagattgaagctgccatcgttagaatcatgaaatcaaggagagta
ctcgatcataacaacataattgctgaggtcacaaagcagttgcagtcacggtttctggca
aaccccacggagattaaaaaacggattgagtccctcattgaaagggatttcttggagagg
gataatgtagacagaaaattgtatcggtatcttgcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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