KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100388423
Entry
100388423         CDS       T03264                                 
Symbol
TRAF5
Name
(RefSeq) TNF receptor-associated factor 5 isoform X3
  KO
K09849  TNF receptor-associated factor 5
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04064  NF-kappa B signaling pathway
cjc04217  Necroptosis
cjc04621  NOD-like receptor signaling pathway
cjc04657  IL-17 signaling pathway
cjc04668  TNF signaling pathway
cjc05163  Human cytomegalovirus infection
cjc05168  Herpes simplex virus 1 infection
cjc05169  Epstein-Barr virus infection
cjc05170  Human immunodeficiency virus 1 infection
cjc05200  Pathways in cancer
cjc05203  Viral carcinogenesis
cjc05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100388423 (TRAF5)
   04668 TNF signaling pathway
    100388423 (TRAF5)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    100388423 (TRAF5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100388423 (TRAF5)
   04657 IL-17 signaling pathway
    100388423 (TRAF5)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100388423 (TRAF5)
   05203 Viral carcinogenesis
    100388423 (TRAF5)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100388423 (TRAF5)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100388423 (TRAF5)
   05168 Herpes simplex virus 1 infection
    100388423 (TRAF5)
   05163 Human cytomegalovirus infection
    100388423 (TRAF5)
   05169 Epstein-Barr virus infection
    100388423 (TRAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cjc04121]
    100388423 (TRAF5)
Ubiquitin system [BR:cjc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100388423 (TRAF5)
SSDB
Motif
Pfam: TRAF-mep_MATH zf-TRAF TRAF3_RING zf-C3HC4_2 zf-C3HC4 zf-TRAF_2 PHM7_cyt Mt_ATP_synt zf-C3HC4_4 zf-RING_2 zf-RING_UBOX zf-ACC zf-RING_6 Sina_ZnF TRAFD1-XIAF1_ZnF ATG16 Acetyltransf_11 DUF4094
Other DBs
NCBI-GeneID: 100388423
NCBI-ProteinID: XP_008983520
Ensembl: ENSCJAG00000000257
UniProt: U3DJM8
Position
19:complement(13938182..13986506)
AA seq 558 aa
MAYSEEHRGEPCGFIRQNSGNSISLDFEPNIEYRFVEPLEERYKCAFCHSVLHNPHQTGC
GHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNCCKREVLNLYVYCSNAPGCNAKL
ILGRYQDHLQQCLFQAVQCSNENCQEPVLRKDMKEHLSTYCQFREEKCVYCKKDVVVINL
QNHEENLCPEYPVVCPNNCSKIILKTEVDEHLAVCPEAEQDCPFKHYGCAVMDKRRNLQE
HEQSALREHMRLVLEKNVQLEEQISDLYKSLGQKESKIQKLEETISKIEKEFKQHTQFFG
RNGSFLSNIQVFASHIDKSAWLEAQMHQLSQTVKQQQNKFDLRPLMEALDTVKQKITLLE
NNDQRLAVLEEETNKHDTHINIHKAQLNKNEERFKLLEGTCYNGKLIWKVTDYKMKKREA
VDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQ
RVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGEMNIASGCPRFVAHSVLENAKNTYIK
DDTLFLKVAVDLTDLEDL
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggcttattcagaagagcatagaggtgagccctgtggtttcatccgccagaattccggc
aactccatttccttggactttgagcccaatatagagtaccggtttgtggagccgttggaa
gaacgctacaaatgtgccttctgccactcggtgcttcacaacccccaccagacgggatgt
gggcaccgcttctgccagcactgcatcctgtccctgagagaattaaacacagtgccaatt
tgccctgtagataaggaggtcatcaaatctcaggaggtttttaaagacaattgctgcaaa
agagaagtcctcaacttatatgtatattgcagcaatgctcctggatgtaatgcgaagctt
attctgggccggtaccaggatcaccttcagcagtgcttatttcaagctgtgcagtgttct
aatgagaactgccaggaaccagtcctacgaaaagacatgaaagagcatttgagtacatac
tgtcagtttcgagaggaaaaatgtgtttactgcaaaaaggatgtggtagtcatcaatcta
cagaatcatgaggaaaacttgtgtcctgaatacccggtagtttgtcccaacaattgttcg
aagattattctaaaaacggaggtggatgaacacctggctgtatgtcctgaagctgagcaa
gactgtccttttaagcactatggctgtgctgtaatggataaacggaggaacctgcaggaa
catgagcagtcagccttacgggagcacatgcgtttggttttagaaaagaacgtccaatta
gaagaacagatttctgacctatacaagagcctaggacagaaagaaagtaaaatccagaag
ctagaagaaactataagtaaaattgaaaaggagttcaagcagcatacacagttctttggc
agaaatggaagcttcctctcaaacatccaggtttttgccagtcacattgacaagtcggct
tggctagaagctcaaatgcatcaattatcacaaacggttaaacagcaacaaaataaattt
gacctgaggcctttgatggaagcacttgatacagtgaaacagaaaattaccctgctagaa
aacaatgatcaacgattagctgttttagaagaggaaactaacaaacatgatacccacatt
aatattcataaagcacagctgaataaaaatgaagagcgatttaaattgctggagggtact
tgctataatggaaagctcatttggaaggtgacagattacaagatgaagaagagagaggcg
gtggacgggcacacagtgtccatcttcagccagtccttctacaccagccgctgtggctac
cggctgtgtgctagagcatacctgaatggggatgggtctgggaaggggacacacctgtcc
ctgtactttgtggtcatgcgaggagagtttgactcattgttgcagtggccattcaggcag
agggtgaccctgatgcttctggaccagagtggcaaaaagaaccacattatggagaccttc
aaggctgaccccaacagcagcagctttaaaagacctgatggggagatgaacattgcatct
ggctgtccccgctttgtggctcattctgttttggagaatgccaagaacacctacattaaa
gatgacactctgttcttgaaagtggccgtggacttaactgacctggaggatctctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (18)   
   UniProt (1)   
   RefSeq(pep) (17)   
DNA sequence (25)   
   RefSeq(nuc) (17)   
   GenBank (4)   
   EMBL (4)   
Protein domain (18)   
   Pfam (18)   
All databases (105)   

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