KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100388544
Entry
100388544         CDS       T03264                                 
Symbol
EIF4A1
Name
(RefSeq) eukaryotic initiation factor 4A-I
  KO
K03257  translation initiation factor 4A
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100388544 (EIF4A1)
   03012 Translation factors [BR:cjc03012]
    100388544 (EIF4A1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjc04147]
    100388544 (EIF4A1)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100388544 (EIF4A1)
   mRNA cycle factors
    Stress granule specific factors
     100388544 (EIF4A1)
Translation factors [BR:cjc03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    100388544 (EIF4A1)
Exosome [BR:cjc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100388544 (EIF4A1)
  Exosomal proteins of bladder cancer cells
   100388544 (EIF4A1)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 UvrD-helicase Flavi_DEAD AAA_30 Helicase_RecD
Other DBs
NCBI-GeneID: 100388544
NCBI-ProteinID: NP_001192066
Ensembl: ENSCJAG00000015114
UniProt: U3DYJ0
Position
5:70220564..70227377
AA seq 406 aa
MSASQDSRSRDNGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQ
RAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVV
MALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFV
LDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEE
LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgtctgcgagtcaggattcccgatccagagacaatggccctgatgggatggagcccgaa
ggcgtcatcgagagtaactggaatgagattgttgacagctttgatgacatgaacctctcg
gagtcccttctccgtggcatctacgcctatggttttgagaagccttctgccatccagcag
cgagccattctaccttgtatcaagggttatgacgtgattgctcaagcccaatctgggact
gggaaaacggccacatttgccatatcgattctgcagcagattgagttagatctaaaggcc
acccaggccttggtcctagcgcccactcgagaattggctcagcagatacagaaggtggtt
atggcactaggagactacatgggtgcctcctgtcacgcctgtattgggggcaccaatgtt
cgtgctgaggtgcagaaactgcagatggaagctccccatatcatcgtgggaacccctggc
cgtgtgttcgatatgcttaaccggaggtacctgtctcccaaatacatcaaaatgtttgta
ctggacgaagctgatgaaatgttaagccgtggattcaaggaccagatctatgacatcttc
caaaagctcaacagcaacacccaggtagttttgctgtcagctacaatgccttctgacgtg
cttgaggtgaccaagaagttcatgagggaccccattcggattcttgtcaagaaggaagag
ttgaccttggagggtatccgccaattctacatcaatgtggaacgagaggaatggaagctg
gacacactgtgtgacttgtatgaaaccctgaccatcacccaggcagtcatcttcatcaac
acccgaaggaaggtggactggctcactgagaagatgcatgctcgagatttcactgtctct
gccatgcatggagatatggaccaaaaggaacgagatgtaatcatgagggaatttcgttct
ggctctagcagagttttgattaccacagacctactggccagaggcattgatgtgcagcag
gtttctttagtcatcaactatgaccttcccaccaacagggaaaactatatccacagaatc
ggtcgaggtggacggtttggccgtaagggtgtggctattaacatggtgacagaagaagac
aagcggactcttcgagacatagagaccttctacaacacctccattgaggaaatgcccctc
aatgttgctgacctcatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (114)   
   KEGG ORTHOLOGY (1)   
   RefGene (109)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (9)   
   Pfam (9)   
All databases (147)   

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