KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100390837
Entry
100390837         CDS       T03264                                 
Symbol
TRIM38
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38 isoform X1
  KO
K12014  tripartite motif-containing protein 38 [EC:2.3.2.27]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cjc04121]
    100390837 (TRIM38)
Enzymes [BR:cjc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100390837 (TRIM38)
Ubiquitin system [BR:cjc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100390837 (TRIM38)
SSDB
Motif
Pfam: SPRY PRY zf-C3HC4_4 zf-RING_UBOX zf-B_box zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 Trm112p zf-RING_6 U-box IBR zf-RING_5 zf-Nse DUF5094 CrtO zf-RING_10 HscB_4_cys
Other DBs
NCBI-GeneID: 100390837
NCBI-ProteinID: XP_002746174
Ensembl: ENSCJAG00000010938
UniProt: F7GAP3
Position
4:complement(3289248..3471988)
AA seq 465 aa
MASTTSTKRMMEEATCSICLSLMTNPVSVNCGHSYCQLCIMDFFKNPSQKQLRQKMLWCP
QCRAPFHLDSVRPNKQLGNLIEALKEMDHEMSCEEHREQLHLFCEDEGRLICWRCERAPQ
HKGHTTVLVEEVCQGYKEKLQNAVTNLRQLEDRCTEQKLFTAIQITKWKEKIQIQRQKIQ
SDFKSLQSFLHEEEKCYLWRLEKEEQQTLSRLRDREASLGLKSDELNRHILELEEKCQGS
AQKLLQNVNDTLSRSGAVKLETSEAVSLELHTMCNVSELYFDVKKMLRSHQVSVTLDPDT
AHHELILSEDRRQVTRGYPQQNQDTSSRRFSALPCVLGCEGFTSGRCYFEVDVGEGTGWD
LGVCVENVQRGTGMKQEPQFGFWTLRLCKKKGYVALTSPPTSLLLPEQPLVVGVFLDCEA
GVVSFYNGTTGCHIFTFPKASFSDTLRPYFQVYHYSPLFLPPLDD
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggcctcaaccaccagcaccaagaggatgatggaggaagccacctgctccatctgcctg
agcctgatgacgaacccagtaagcgtcaactgtggacacagctactgccagttgtgtata
atggacttctttaaaaacccaagccaaaagcaactgaggcagaagatgctctggtgtccc
cagtgccgggctccattccacttggatagcgtcagacccaacaagcagctgggaaacctt
attgaagctctcaaagagatggatcacgaaatgtcatgtgaggaacacagagagcagctc
cacctgttctgtgaagatgaaggacggctcatctgctggcgctgtgagcgggcaccgcag
cataaaggtcataccacagtgcttgttgaagaggtatgccagggctacaaggaaaagctc
cagaatgctgtgacaaatttgaggcaacttgaagacagatgtacggagcagaagctgttc
acagcaatacaaataactaaatggaaagagaagatacagattcagagacaaaaaatccag
tctgactttaagagtctccagagtttcctacatgaggaagagaaatgttatctctggaga
ctggagaaagaagaacaacagactctgagtagactgagggaccgtgaggccagtctgggg
ctgaagagcgacgaactcaatagacacatcctggaactggaggaaaaatgtcagggctca
gcccaaaaattgctgcagaatgtgaatgacactttgagcaggagtggagctgtgaagctg
gaaacatcagaggccgtctccttggagcttcatactatgtgcaatgtttctgagctttat
tttgacgtgaagaaaatgttaaggagtcatcaagtcagtgtgactctggatccagataca
gctcatcatgaactaattctgtctgaagatcggagacaagtgactcgaggatacccccag
cagaatcaggacacttcttccaggagatttagtgccttgccctgtgtcttgggttgtgaa
ggcttcacctcaggaagatgctactttgaagtggatgttggagaaggaactgggtgggat
ttaggagtttgtgtggaaaatgtgcagaggggcactggcatgaagcaagagcctcagttt
ggattctggaccctaaggctgtgcaaaaagaaaggttatgtagcgctaacttctccccca
acttcccttcttctgcctgagcagcccctggttgtgggagtttttctggactgtgaggcc
ggagttgtatccttttacaacgggactactggctgccacatcttcaccttcccaaaggct
tccttctctgatactctccggccctatttccaggtttatcattattctcctttatttctg
cctcccctagatgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (16)   
   RefSeq(nuc) (8)   
   GenBank (4)   
   EMBL (4)   
Protein domain (19)   
   Pfam (19)   
All databases (70)   

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