KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100399740
Entry
100399740         CDS       T03264                                 
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
  KO
K11985  TRAF-interacting protein [EC:2.3.2.27]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cjc04121]
    100399740 (TRAIP)
Enzymes [BR:cjc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100399740 (TRAIP)
Ubiquitin system [BR:cjc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100399740 (TRAIP)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-ANAPC11 zf-C3HC4_3 zf-RING_11 WEMBL Crescentin HIP1_clath_bdg zf-RING-like HMMR_N DUF3450 GAS Zn-ribbon_8 zf-RING_16 FAA_hydro_N_2 FANCL_C Laminin_II DUF745 RINGv GSCFA
Other DBs
NCBI-GeneID: 100399740
NCBI-ProteinID: XP_002758406
Ensembl: ENSCJAG00000004415
Position
15:complement(26182237..26219765)
AA seq 476 aa
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIIN
KLFFDLAQEEENVLDAEFLKNELDNIRAQLSQKEKEKRDTQLIVDSLRDMLEERNATVES
LQQALDKAEMLCSTLKKQMKYLEQQQDETKQAREEARQLRSKMKTMEQIELLLQSQRPEV
EEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELADKLRKDLFSSRSKLQTVY
SELDQAKLELKSAQKDLQSADKEIMSLKKKLTMLQETLNLPPVTSETVDRLVLESPAPVE
VNLKLRRPSFSDDIDLNATFDVDTPPARPSSSQHGYSKKLCLEKSHSPIQDMPKKICKGP
KKICKGPKKESQLSLGGQSCGGEPDEELVGAFPLFVRNAILGQKQLRRPRTESCCSKDVV
RTGFDGLGGRTKFIQPTDTAMIRPLPVKPKTKAKQRVRVKTVPSLSQAKLDTFLWS
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgcctatccgtgctctgtgcactatctgctccgacttctttgaccactcccgcgatgtg
gctgccatccactgcggccacactttccacctgcagtgcctaattcagtggttcgaaaca
gcaccaagtcggacctgcccacagtgccgaatccaggttggcaaaagaaccattatcaat
aagctcttctttgatcttgcccaggaggaggagaatgtcttggatgcagaattcttaaag
aatgaactggataatatcagagcccagctttcccagaaagagaaggagaaacgggacacc
cagctcattgtcgactctctgcgggacatgctggaagaacgcaatgctactgtggaatct
ctgcagcaggccttggacaaggctgagatgctgtgctccacactgaaaaagcagatgaag
tacttggagcagcaacaggatgagaccaaacaagctcgagaggaggcccgccaactcagg
agcaagatgaagaccatggaacagatcgagcttctactccagagccagcgccctgaggtg
gaggagatgatccgagacatgggtgtgggacagtcagcggtggaacagctggctgtgtac
tgtgtgtctcttaagaaggagtacgagaatctaaaagaggcacggaaggcctcaggggag
ctggctgacaagctgaggaaggatttgttttcctccagaagcaagttgcagacagtctac
tctgaattggatcaggccaagttagaactgaagtcggcccagaaggacttacagagtgct
gacaaggaaatcatgagcctgaaaaagaagctaacgatgttgcaggaaaccttgaacctg
ccaccagtgaccagtgagactgttgaccgcctggttttagagagcccagcccctgtggag
gtgaacctgaagctccgccggccatccttcagtgatgatattgatctcaatgctaccttt
gatgtagatactcctccagcccggccctccagctcacagcatggttactccaaaaagctt
tgcctggagaagtcacactcccccattcaggatatgcccaagaagatatgcaaaggcccc
aagaagatatgcaaaggccccaagaaggagtcccagctttcactgggtggccagagctgt
ggaggagagccagatgaggaactggttggtgccttccctctttttgtccggaatgccatc
ctgggccagaaacagctcaggaggcccaggacagagtcctgttgcagcaaagatgtggta
aggacaggctttgatgggctcggtggccggacaaaattcatccagcctactgacacagcc
atgatccgcccattgcctgttaagcccaagacaaaggctaagcagagagtgagggtgaag
acagtgccttctctttcccaggccaagctggacaccttcctgtggtcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (25)   
   Pfam (25)   
All databases (49)   

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