KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100402064
Entry
100402064         CDS       T03264                                 
Symbol
GABRB2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
  KO
K05181  gamma-aminobutyric acid receptor subunit beta
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04080  Neuroactive ligand-receptor interaction
cjc04723  Retrograde endocannabinoid signaling
cjc04726  Serotonergic synapse
cjc04727  GABAergic synapse
cjc05032  Morphine addiction
cjc05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100402064 (GABRB2)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    100402064 (GABRB2)
   04726 Serotonergic synapse
    100402064 (GABRB2)
   04723 Retrograde endocannabinoid signaling
    100402064 (GABRB2)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    100402064 (GABRB2)
   05033 Nicotine addiction
    100402064 (GABRB2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cjc04040]
    100402064 (GABRB2)
Ion channels [BR:cjc04040]
 Ligand-gated channels
  GABA-A
   100402064 (GABRB2)
SSDB
Motif
Pfam: Neur_chan_memb Neur_chan_LBD
Other DBs
NCBI-GeneID: 100402064
NCBI-ProteinID: XP_035140145
Ensembl: ENSCJAG00000015148
Position
2:complement(22247960..22510829)
AA seq 512 aa
MWRVRKRGYFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPV
AVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDT
YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIES
YGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKR
NIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKI
FYKDIKQNGTQYRSLWDPTGSLSPTRRTTNYDFSLYTMDPHENILLSTLEIKNEMATSEA
VMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPD
LTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgtggagagtccggaaaaggggctactttgggatttggtccttccctttaataatcgcc
gctgtctgtgcgcagagtgtcaatgaccctagtaatatgtcgctggttaaagagacggtg
gatagactcctgaaaggctatgacattcgtctgagaccagattttggaggtccccctgtg
gcagtgggaatgaacattgacattgccagcatcgatatggtttctgaagtcaatatggat
tataccttgacaatgtactttcaacaagcctggagagataagaggctgtcctataatgta
atacctttaaacttgactctggacaacagagtggcagaccaactctgggtgcctgatacc
tatttcctgaatgataagaagtcatttgtgcacggagtgactgttaagaaccgcatgatc
cgcctgcatcctgatggcactgtcctttatggactcagaatcacaaccacagctgcctgc
atgatggacctaaggaggtacccactggatgaacaaaactgcaccttggaaattgagagc
tatggatacacaactgatgacattgaattttactggcgtggcgatgataatgcagtaaca
ggagtaacaaaaattgaacttccacagttctctattgtagattacaaacttatcaccaag
aaagttgttttttccacaggttcctatcccaggttatccctcagctttaagcttaagaga
aacattggctactttatcctgcaaacgtacatgccttccatcctgattaccatcctctcc
tgggtctccttctggatcaattacgatgcttcggctgcaagagtggcattaggaatcaca
actgtcctcacaatgaccacaatcaacacccacctccgggaaactcttcctaaaatcccc
tatgtgaaggccattgacatgtacctgatggggtgctttgtctttgttttcatggcactt
ctggaatatgctctagtcaactacatcttctttgggagggggccccagcgccaaaagaaa
gcagctgagaaggctgccagtgccaacaatgagaagatgcgcctggatgtcaacaagatt
ttttataaagatattaaacaaaatgggacccaatatcgatccttgtgggaccctactgga
agcctctccccaactagacggactaccaattacgatttctctctgtatacgatggacccc
catgagaacatcttactgagcactctcgagataaaaaatgaaatggccacatctgaggct
gtgatgggacttggagaccccaggagcacaatgctagcctatgatgcctccagcatccaa
tatcggaaagctgggttgcccaggcatagttttggccgaaatgctctggaacgacatgtg
gcacaaaagaaaagtcgcctgaggagacgcgcctcccaactgaaaatcaccatccctgac
ttgactgatgtgaatgccatagatcggtggtctcgcatattcttcccagtggttttttcc
ttcttcaacatcgtctattggctttattatgtgaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (21)   
   RefSeq(nuc) (11)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system