KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100412514
Entry
100412514         CDS       T03264                                 
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X4
  KO
K05678  ATP-binding cassette, subfamily D (ALD), member 4 [EC:7.6.2.8]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc02010  ABC transporters
cjc04146  Peroxisome
cjc04977  Vitamin digestion and absorption
cjc04980  Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    100412514 (ABCD4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    100412514 (ABCD4)
 09150 Organismal Systems
  09154 Digestive system
   04977 Vitamin digestion and absorption
    100412514 (ABCD4)
   04980 Cobalamin transport and metabolism
    100412514 (ABCD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cjc02000]
    100412514 (ABCD4)
Enzymes [BR:cjc01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.8  ABC-type vitamin B12 transporter
     100412514 (ABCD4)
Transporters [BR:cjc02000]
 ABC transporters, eukaryotic type
  ABCD (ALD) subfamily
   ABCD4 subgroup
    100412514 (ABCD4)
SSDB
Motif
Pfam: ABC_membrane_2 ABC_tran AAA_16 AAA_22 AAA_30 DEAD AAA_7 AAA_29 AAA_23 nSTAND3 T2SSE RsgA_GTPase
Other DBs
NCBI-GeneID: 100412514
NCBI-ProteinID: XP_035116900
Ensembl: ENSCJAG00000020446
Position
10:complement(105126366..105177895)
AA seq 447 aa
MASKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTVVNKTLMGPIVMKLVHQEKLE
GDFRFKHMQIRVNAEAAAFYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTFDY
LGSILSYVVIAIPIFSGVYGDLSPAELSILVSKNAFVCIYLISCFTQLIDLCTTLSDVAG
YTHRIGQLRETLLDMSLKSQDCEILGESEWGLDKTPGWPAAEPADMAFLLERVSISVPSS
DKPLIKDLSLQISEGQSLLITGNTGTGKTSLLRVLGGLWTSTRGSVQMLTDFGPHGVLFL
PQKPFFTDGTLREQVIYPLKEIYPDSGSTDDERILRFLELAGLSSLVARTEGLDQQVDWN
WYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVESELYRIGQQLGMTFISVGHR
QSLEKFHSLVLKLCGGGRWELMRIKEE
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggccagcaagctgatcatctcccccttcaccctcgtctactacacttaccagtgcttc
caaagcacaggctggctcgggcctgtgagcatcttcgggtatttcatcctgggaactgtg
gtgaacaaaactttgatggggcccattgtgatgaagctggtgcatcaggagaagctggag
ggagattttaggtttaagcacatgcagattcgggtgaatgcggaggctgctgctttctac
agagctgggcatgtggagcacatgaggacagaccgcaggctgcagagactccttcagacc
cagagggagctgatgtccaaggagctctggctgtacatcggcatcaacaccttcgactat
ctgggcagcatcctgagttacgttgtcatcgcaatccccattttcagtggggtctatgga
gacctgagtcccgcagagcttagcatcctggtcagcaagaacgcctttgtgtgcatctac
ctcatcagctgcttcactcagcttatcgacctgtgcacaacgctctcggatgtggctggc
tacacgcacaggattgggcagcttcgggagacgctgctggacatgtccctgaagtcacag
gactgcgagatcctgggcgagagcgagtggggcttggacaagaccccgggatggccagca
gcagagccagcagacatggcgtttctccttgagcgggtctccatctctgttccctcctct
gacaaacccctaatcaaggatctgagcctacagatctccgagggacagagcctgctcatc
acaggcaacacgggcactggcaagacctccttgctccgggttctgggcggcctctggacg
agcacacggggctcagtgcagatgctgacggactttgggccccatggggtgctattcctg
ccacaaaagccgttcttcactgacgggacccttcgggagcaggtgatatatcccctgaag
gagatctaccctgactcaggttctactgatgatgagaggatcttgaggttcttggaattg
gcaggcctgtccagcttggtggcaaggacagagggtctggaccagcaggtggattggaac
tggtatgatgttctgtccccaggggagatgcaacggctctcttttgcccgactcttctac
ctgcagccgaagtatgcagtgcttgatgaagccaccagtgccctgacagaggaggtggag
agcgagctctatcgcatcggccagcagttggggatgacattcatcagtgtgggacatcga
cagagccttgagaagtttcattccttggttctgaaactctgtggaggaggaagatgggaa
ctgatgagaatcaaagaggaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (16)   
   RefSeq(nuc) (8)   
   GenBank (4)   
   EMBL (4)   
Protein domain (12)   
   Pfam (12)   
All databases (53)   

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