KEGG C.jejuni: Cj0479

Campylobacter jejuni NCTC11168: Cj0479

Entry

Cj0479 CDS C.jejuni

Gene name rpoC

Definition DNA-directed RNA polymerase beta' chain (EC:2.7.7.6)

Orthology K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]

Pathway cje00230 Purine metabolism
cje00240 Pyrimidine metabolism
cje01100 Metabolic pathways
cje03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:cje00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:cje00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:cje03020]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3
RNA_pol_Rpb1_4 Peptidase_M23

Other DBs NCBI-GI: 218562134
NCBI-GeneID: 904807
Sanger: Cj0479
GeneDB: Cj0479
UniProt: Q9PI30

Position 443121..447674

AA seq 1517 aa
MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAFYDNESTKKVEYCDVLNEEQYQNLMQR
YENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMGATNSEAKKKTIIKRLKVVENFLNS
NLNANTDSDEAVPNRPEWMMITNLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNTR
LKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRF
RQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLLAKLEEKGYATTVKQAK
KMIENKTNEVWECLEEVVKGHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFN
ADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKSVTVPSQDMVLGIYYLSLEKA
GAKGSHKICTGIDEVMMALESKCLDIHASIQTMVDGRKITTTAGRLIVKSILPDFVPENS
WNKVLKKKDIAALVDYVYKQGGLEITASFLDRLKNLGFEYATKAGISISIADIIVPNDKQ
KAIDEAKKQVREIQNSYNLGLITSGERYNKIIDIWKSTNNVLSKEMMKLVEKDKEGFNSI
YMMADSGARGSAAQISQLAAMRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKG
LADTALKTANAGYLTRKLIDVAQNVKITIEDCGTHEGVEINEITADSSIIETLEERILGR
VLAEDVIDPITNSVLFAEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGIN
LGEGKLVKPGEAVGIISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYN
LKTYKNKEGKNIVANRRNAAVLLVEPKIKTPFKGVINIENIHEDVIVSIKDKKQEVKYIL
RKYDLAKPNELAGVSGSIDGKLYLPYQSGMQVEENESIVEVIKEGWNVPNRIPFASEILV
EDGEPVVQNIKAGEKGTLKFYILKGDGLDRVKNVKKGDIVKEKGFFVVIADENDREAKRH
YIPRESKIEFNDSEKIDDANTIIASAPKKERKVIAEWDAYNNTIIAEIDGVVSFEDIEAG
YSADEQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYHLEPKTVIFVHDGDKIAQ
ADILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
QAEDGTSAEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISEIQ
QVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGHTKFIEGDLVSRRKFREENERIIRMGGE
PAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRMIP
VGTGLYGEQNLKLKEQE

NT seq 4554 nt +upstreamnt +downstreamnt
atgagtaaatttaaagtaatagaaattaaagaagatgcaagacctagagattttgaagca
tttcaactaagacttgcaagtcctgaaaaaatcaaatcatggtcttatggagaagtaaaa
aaaccagaaactattaattatagaaccttaaagcctgaaagagatgggcttttttgtgca
aagatttttggacctataagagattatgagtgtctttgtggtaaatacaaaaaaatgcgt
tttaaaggcgttaagtgtgaaaaatgtggtgttgaagtagcaaattcaaaagtgcgtcgt
tctagaatggggcatatcgagcttgtaactcctgtggctcatatttggtatgttaattct
cttccaagccgtataggaacgcttttgggtgttaagatgaaagatcttgagcgcgtgctt
tattatgaagcttatattgttgaaaacccaggtgatgctttctatgataatgaaagtact
aaaaaagtggaatattgcgatgttttgaacgaagagcaatatcaaaatttaatgcaacgc
tatgaaaatagcggctttaaagcaagaatgggtggagaagttgttcgtgatttacttgca
aatttagatcttgtagcgcttttaaatcagcttaaagaagaaatgggggctacaaattca
gaggctaagaaaaaaactatcattaaacgcttaaaagttgtagaaaatttcttaaattca
aatttaaacgccaataccgatagcgacgaagctgtaccaaatcgtcctgaatggatgatg
attacaaatcttccagttttaccgccagatttgcgtcctttagtggctttagatggtggg
aaatttgcagtttctgatgtgaatgacttatatcgtcgtgttatcaatagaaatacacgt
cttaaaaaacttatggaacttgatgcacctgaaatcattatcagaaatgaaaaaagaatg
cttcaagaggctgttgatgcgctttttgacaacggtcgtcgtgctaatgctgtaaaagga
gcaaataaacgcccattgaaatctttaagtgaaatcatcaaagggaaacaaggacgtttt
agacaaaatctactaggtaaaagggtggatttctcaggtcgtagcgttattgttgtaggt
ccaaaacttagaatggatcaatgcggtttacctaaaaaaatggctttagagctttttaag
ccacatcttttagctaagcttgaagaaaaaggttatgcaaccacagtaaaacaagctaaa
aaaatgatagaaaataaaaccaatgaagtttgggaatgtttagaagaggtagtaaaggga
catcctgttatgctaaaccgtgcacctactttgcataagctttctatccaagcttttcat
cctgttttagtggaaggtaaggctatacaacttcatcctttggtttgtgcagcatttaac
gcagactttgatggggatcaaatggcagtgcatgtaccgctttctcaagaggctattgca
gaatgtaaagtgcttatgctttcatcaatgaatattcttttaccagcaagcggtaagtct
gtaaccgttccatcgcaagatatggttttaggaatttattatctttcgttggaaaaagca
ggtgctaaaggttcgcataaaatttgtacaggcattgatgaagtgatgatggcacttgaa
agcaagtgtttggatattcatgcgagcatacaaactatggtagatggtagaaagattacc
actacagcaggaagattgattgttaaatccatcttgcctgattttgtgcctgaaaatagt
tggaataaagtcttaaagaaaaaagacattgctgcgcttgtagattatgtttataaacaa
ggtggtttagagattacagcaagtttcttagatagacttaaaaatttaggttttgaatat
gcaactaaagcaggtatttcaatttcgattgcagatattattgttcctaatgataaacaa
aaagctatcgatgaagcaaaaaaacaagtaagagaaattcaaaattcttataatctcggt
ttgattacttcaggggaaagatacaataaaatcattgatatttggaaaagtacaaacaat
gttctttcaaaagaaatgatgaagcttgtagaaaaagataaagaaggttttaactctatt
tatatgatggcagattctggtgctaggggtagtgcagctcaaatttctcagcttgctgcg
atgagaggacttatgaccaaacctgatggttctattatcgaaacgcctattatttcaaat
ttccgtgaagggctaaatgttcttgaatactttatttcaactcacggtgctagaaaaggt
cttgcagataccgctcttaaaacagcaaatgcgggttatttgacaagaaaactcatcgat
gttgcacaaaatgtaaaaattaccattgaagattgtggaacacatgagggtgttgaaatc
aatgaaattaccgcagatagttctattatagaaactttagaagaaagaattttaggcagg
gttttagctgaggatgtgattgatcctattacaaattctgtgctttttgcggaaggtact
ttaatggatgaggaaaaagcaaaaattcttggcgaaagcggtataaaaagtgtcaatatc
cgcactcctattacctgcaaagctaaaaaaggaatttgtgcaaaatgttatggtatcaat
cttggtgaaggtaaattagtaaaaccaggcgaagcagtgggaattatttccgctcaatct
atcggtgaaccaggaacgcagctaactctaagaactttccatagcgggggaactgcaagt
acggatttacaagatagacaagtaagcgcacaaaaagaaggttttataagattttataat
cttaaaacttataaaaacaaagaaggtaaaaatatcgtagcaaatcgtagaaatgcggcg
gttttacttgtggagccaaaaatcaaaactccatttaaaggtgtgattaatatagaaaat
attcatgaagatgtgattgtttctattaaagataaaaaacaagaagtaaaatacatatta
agaaaatacgatcttgctaaaccaaatgaattagcaggtgtaagtggcagtatagatgga
aaactttatttgccatatcaaagcggcatgcaagtagaagaaaatgaaagtatcgtagaa
gtgattaaagagggttggaatgtaccaaatcgtattccttttgcgagtgaaattttagta
gaagatggcgagcctgtagttcaaaatatcaaagcaggcgaaaaaggaacactcaaattt
tacatccttaaaggcgatggtttagatagagtaaaaaatgttaaaaaaggtgatattgtt
aaagaaaaaggattctttgtagtgattgctgatgaaaatgatagagaagcaaaaagacac
tatatcccaagagaatctaagatagaatttaacgatagtgaaaaaatcgatgacgcaaat
actatcattgcaagtgctcctaaaaaagaaagaaaagtgattgcagaatgggatgcttat
aataatactatcattgcagaaattgatggtgttgtaagctttgaggatattgaagcaggt
tatagtgccgatgagcaaattgatgaagctacaggtaagcgttctttagtaattaatgag
tatttacctagcggagttagaccaactttggtaattgcaggaaaaggtgataaagctgtg
cgttatcaccttgaaccaaaaaccgttatttttgttcatgatggcgataaaattgctcaa
gcagatattttagcaaaaactccaaaagcagcagctaaatcaaaggatattacaggaggt
cttccaagagtttctgaactttttgaagcaagaaaaccaaaaaatgcggctgtgattgca
gaaattgatggtgttgttcgttttgataagcctttgcgttctaaagaaagaattattatc
caagcagaagatggaacaagtgctgagtatttaatcgacaaatcaaaacatattcaagta
agagatggagagtttattcatgcaggtgaaaaacttacagatggagttgtttcgagtcat
gatgtgcttaaaattttaggtgaaaaagccttgcattattatttgatttctgaaattcag
caagtttatcgcggacaaggtgttgtgatttctgataaacatatagaagttatcgtttct
caaatgctaagacaagtaaaagttgtagatagtggacatacgaaatttattgaaggtgat
ttggtttcaagacgtaaattccgtgaagaaaatgaaagaatcattagaatgggtggagaa
ccagctattgccgagcctgtgcttttaggtgtaacaagagcagcgattggaagtgatagt
gtgatttctgcggcttcattccaagaaactaccaaagttttaactgaagcaagtatagca
ggtaaatttgactacttagaagatttaaaagaaaatgttattctaggtagaatgattcct
gttggaacagggctttatggcgaacaaaatttaaaacttaaagaacaagaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   GENEDB-CJE (1)   
   SANGER-CJE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)

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