KEGG   Coturnix japonica (Japanese quail): 107321177
Entry
107321177         CDS       T04297                                 
Symbol
GTF2H3
Name
(RefSeq) general transcription factor IIH subunit 3
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03022  Basal transcription factors
cjo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107321177 (GTF2H3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107321177 (GTF2H3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjo03021]
    107321177 (GTF2H3)
   03400 DNA repair and recombination proteins [BR:cjo03400]
    107321177 (GTF2H3)
Transcription machinery [BR:cjo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107321177 (GTF2H3)
DNA repair and recombination proteins [BR:cjo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107321177 (GTF2H3)
SSDB
Motif
Pfam: Tfb4 TetR_C_38 DivIVA
Other DBs
NCBI-GeneID: 107321177
NCBI-ProteinID: XP_015733306
Position
15:complement(4201514..4206192)
AA seq 336 aa
MAAPALLGAMRRNAMMCGMTTPAGDTSGGMGADEELSLLVIVIDTNPIWWGKRAQGEAEF
TLSKCVDAAMVLGNSHLFMSRTNKLAVMASHTQESRFLYPGKRWASADLLGDGGNSVESN
CSGSKDGKYELLTAINDAIAEEIKDLMTKTDMMGQQTETLLAGSLAKALCYINKMSKEVK
ANQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQSILIDACVLDSDSGLLQQACDITGG
IYLKVPHLPSLLQYLLWVFLPDQEQRSQLVLPPPVHVDYRAACFCHRNLIEIGYVCSVCL
SIFCNFSPICSTCETAFKISLPPVMKAKKKKLKLAV
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggctgcccccgccctgctcggtgccatgcggcgcaatgcgatgatgtgcggtatgacg
acaccagcgggcgacaccagcggcgggatgggagcggacgaggagctgagcctgctggtc
atcgtcatcgacaccaaccccatctggtgggggaagcgggcgcagggggaggctgagttc
accctgtcgaaatgtgtggacgcagcgatggtgctggggaactcccacctgttcatgagc
cgcaccaacaaactggccgtgatggccagtcacacgcaggaaagccgtttcttgtaccct
gggaagcgttgggcttctgcggatctccttggagatggtggtaactccgtggaatccaat
tgttctggcagcaaggatggaaaatatgaattgttaactgcaatcaatgatgcaattgca
gaagagattaaagacctcatgacgaaaactgacatgatgggccagcaaacagagactctc
ctagcagggtctcttgccaaagcactttgttatattaacaagatgagcaaagaggtgaaa
gccaatcaggaaatgaaatcaaggattttggtcataaaagctgcagaagacagtgcatta
caatatatgaatttcatgaacgtgatctttgcagcacagaaacagagtattttgattgat
gcttgtgtcttggactctgattcaggccttctacaacaggcttgtgacattacaggcggc
atataccttaaagtgccccacctgccatccctcctgcagtatttgttgtgggtatttctc
cctgatcaagagcaaagatcacagcttgtgcttccacctcccgttcatgttgactacaga
gcagcgtgtttctgtcatcgaaatctcattgagattggttatgtatgctcggtgtgcttg
tcaatattctgcaacttcagtccaatttgcagtacatgcgagactgccttcaaaatatca
ctgccgcctgtcatgaaagctaagaagaagaaattaaagttagctgtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system