KEGG   Coturnix japonica (Japanese quail): 107325844
Entry
107325844         CDS       T04297                                 
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107325844 (PAN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjo03019]
    107325844 (PAN2)
Enzymes [BR:cjo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     107325844 (PAN2)
Messenger RNA biogenesis [BR:cjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107325844 (PAN2)
  mRNA degradation factors
   3'-5' decay
    Pan complex
     107325844 (PAN2)
SSDB
Motif
Pfam: PAN2_N UCH_1 RNase_T UCH WD40_like
Other DBs
NCBI-GeneID: 107325844
NCBI-ProteinID: XP_015742534
Position
LGE22C19W28_E50C23:1757039..1767036
AA seq 1226 aa
MNFEGLDPSLAEYAPTLHPALDPVLDPHLNPNLLQNVELDPDGVPLEGIAVPESVHIVEG
MYSELHTAVSEVGVPVSVSHFDLHEEMLWVGNHGGHATSFFGPTLERYSSFQVNSSDDIR
QIQSLENGVLFLTKTNLKCMSRGGLIIFDYLMDEAEDMHSLLLTDSSTLLVGGLQNHVIE
IDLNTVQETQKFTVEVPGITIMRQSNRFFFCGHTSGKVSLRDLRTFVVEHEFDAYSGSLS
DFDVHGNLLVTCGFSSRMNGLACDRFLKVYDLRMMRATTPLQVHIDPFFLRFIPTYTSRL
AIISQTGQCQFCEPTGLANPADIFHVNTVGPLIMTFDVSASKQALAFGDSEGCVHLWADS
PEVTFNTYSRETDFALPCIVDTLPHLDWNQDLVPLSLIPVPLTSETLLSDWPAANSAPAP
RRAPPVDPEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKEADNEFDSFSQVPESPIGREE
EPHLYMVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEATGKVNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGAGSSTFGSSGDSVIGQLFSCE
VENCSMCRCGKETVRVSSTLLFTLSYPESTEKPVKDYEFAQILKRSICLEQNTQAWCENC
EKYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYAFQRALMKRGGFEITKGKEM
SLGDWKELGNPEVGHSYPSVEELKNIWIPHAIKMRLTKNKELDVCNWSESDEGSFLPQLS
PNDDPESVYVYDLMATVVHILDSRTGGSLVGHIKVGETYHQRKEGVTHQQWYLFNDFLIE
PVDKCEAVQFDMSWKVPAILYYARRNLNSKYNLISECPSRSGCVGASCLLPADPPYPSLA
VKNPIEASVLLAEASLARKQRKCHATFIPLMLSEMPQAGDLVGLDAEFVTLNEEEAELRS
DGTKSTIKPSQMSVARITCVRGQGPNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAK
ISSKHLTTLKSTYLKLRFLIDVGVKFVGHGLQKDFRVINLMVPKDQVIDTVYLFHIPRKR
MISLRFLAWYFLDLKIQGETHDSIEDARTALQLYRKYLELSNDPDNFRKVLKALYEKGRK
LDWKVPEPDSQSSPKHGAVFPPVLAL
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgaattttgaaggtctcgacccttctcttgctgaatatgcgcctacgttgcatccggcg
ctggatcccgtcctggaccctcatcttaaccccaacctgctgcagaacgtggagctggat
cccgacggggtgcccttagagggtattgcggtgccagagtccgtgcacatcgtggagggc
atgtatagtgagctgcacactgctgtctccgaagtgggagtgcccgtgtctgtctcccat
tttgacctccatgaagaaatgctgtgggttgggaatcatgggggccacgccacctcgttc
tttggcccaacgctggagcgttactcctccttccaagtgaacagcagcgatgacatccgg
cagatccagagcctggagaatggggtccttttcctgaccaaaaccaacctgaagtgcatg
tcacgaggaggcctcatcatatttgactacctcatggatgaggccgaggacatgcacagc
ctcctgctgacggacagcagcactctgctggttggcggactgcagaaccatgtgattgag
atagacctcaacaccgtgcaggagacacagaagttcactgtggaggttcctggcatcacc
atcatgaggcaatcaaaccgcttctttttctgtggtcacacctcagggaaggtctccttg
agggatctacgcacgtttgtggtggaacatgagtttgatgcctactcaggcagcttgtct
gactttgatgtccacgggaacctgctggtgacctgcggcttctccagccggatgaacggc
ctggcctgcgaccgcttcctgaaggtgtacgacctgcgaatgatgagagccaccacccct
ctgcaggtccacatcgaccccttcttcctccgcttcatccccacctacacctcccgcctg
gccatcatctcccagacaggtcaatgccagttctgtgagcccaccggcctcgccaaccca
gccgacatcttccatgtgaacaccgtggggcctctgatcatgaccttcgacgtctcagcc
agcaaacaggccttggcatttggtgactctgagggctgcgtgcacctctgggctgattcc
ccagaggtcacttttaacacctattcccgggagacagactttgctctgccctgcattgtt
gacacgctgccacacttggattggaatcaggacctcgtgccgctatcactcatccctgtg
ccactgaccagtgagaccttgttgtcagactggcctgcagccaactcagccccggcacct
cggcgagctcctccagtagatcccgagattctgcgcaccatgaagaaagtggggttcatt
ggttacgctccaaacccaaggaccaaactccgcaaccagatcccctatcggttaaaagaa
gcagacaatgagtttgacagcttcagccaagttcctgagtccccgattgggcgggaggag
gaacctcacctctacatggtggccaagaagtacaggaaggtcacaatcaaatactccaaa
ctggggctggaagattttgatttcaagcattataacaagactctgtttgcaggcctggag
ccccatatccccaatgcctactgcaactgcatgatccaggtgctgtattttttggagcct
gtccgctgcctggtccagaaccacctgtgccagaaggagttctgcctgggctgcgagctg
ggcttgctcttccacatgcttgatctatcccgaggagacccctgccagggaagcaacttc
ttgcgggctttccgcacaatcccagaggcttcagcactggggctgatcctggctgactca
gacgaagccacagggaaagtgaacctggggcgactgattcagagctggaaccgtttcatc
cttactcagctgcaccaggagacccaggagcaggagggaccgcaggcgtatcggggggct
ggcagcagcacctttgggtcctcgggagattctgttattgggcagctgttcagctgtgag
gtggagaactgcagcatgtgccgctgtgggaaggaaaccgtccgcgtgtcttccacgctg
ctcttcaccctctcctaccctgagagcactgaaaaaccagtcaaagactacgagtttgcc
caaattttaaagagaagcatctgcttggagcagaacacacaggcctggtgtgagaactgt
gagaagtatcagcccacggtccagactaggaatatccgctgccttccagatgtcctggtc
attaactgtgaggtgaacagctccaaggaagcagatttctggaagacacaggctgagtat
gcctttcagagagccctgatgaagagaggaggctttgagatcaccaaaggcaaagaaatg
tctcttggagattggaaggaactgggaaaccccgaggtggggcattcatatccttctgtg
gaggaactgaagaacatttggatcccccacgccatcaagatgaggctgaccaagaataag
gagctcgatgtgtgcaactggagcgaaagcgatgagggctccttcctcccccagctgagt
ccaaatgacgaccccgagtcggtgtatgtctacgatctcatggccacagttgtccacatc
ctggattcccgcacagggggcagcctggtgggtcacatcaaagtgggagagacctaccac
caaaggaaggagggagtcacgcaccagcagtggtatctcttcaatgacttcctcattgag
cccgtggataagtgcgaggctgtgcagttcgacatgagctggaaggtgccagctatcctg
tactatgcccggaggaacctcaactccaagtacaacctcatcagtgagtgtccgagtaga
agtggctgtgtgggggcaagctgtctgctcccagctgatcccccttacccttctcttgca
gtcaagaacccaattgaagccagcgtgctgctggcagaggcctctctggctcgcaagcag
cgcaagtgccacgccaccttcatccccctcatgctgagtgagatgccacaggcaggtgac
ctggtggggctggatgctgagtttgtcacattgaatgaggaggaggctgagctgcgcagc
gatgggaccaaatctaccatcaagcccagccagatgtcggtggccaggatcacgtgcgtg
cggggtcagggtcctaatgagggtgtccccttcatcgatgactacatctccacccaggag
caggtggtggattacctgacgcagtactcggggatcaagcctggagatttggatgccaag
atctcctctaagcacctcaccactctcaaatccacctacctgaagctgcgtttcctcatc
gacgtgggtgtcaagtttgtgggccacgggctgcagaaggatttccgtgtcatcaacctc
atggtgcccaaggaccaagtgatcgacaccgtgtacctgttccacatcccaaggaagaga
atgatttccctgcgcttcctcgcctggtatttcttggaccttaagatccaaggtgagacc
cacgacagcatcgaggacgcccgcacggcgctgcagctgtaccgcaaatacctggagctg
agtaacgaccccgacaacttccgcaaggtgctcaaggctctgtatgaaaagggccgtaag
ctggactggaaggtgcccgaacccgacagccagagcagccccaaacatggggccgtgttt
ccccccgtgctggcgctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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