KEGG   Campylobacter jejuni subsp. jejuni 81116: C8J_0590
Entry
C8J_0590          CDS       T00597                                 
Name
(GenBank) putative ribonuclease
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
cju  Campylobacter jejuni subsp. jejuni 81116
Pathway
cju03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C8J_0590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cju03019]
    C8J_0590
   03016 Transfer RNA biogenesis [BR:cju03016]
    C8J_0590
Enzymes [BR:cju01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     C8J_0590
Messenger RNA biogenesis [BR:cju03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C8J_0590
Transfer RNA biogenesis [BR:cju03016]
 Prokaryotic type
  tRNA degradation factors
   C8J_0590
SSDB
Motif
Pfam: RNB CSD2 OB_RNB Orthopox_F14
Other DBs
NCBI-ProteinID: ABV52189
Position
complement(593045..594979)
AA seq 644 aa
MKEFLNSLSYGISSHEVNNEFKQILRELLTNHIIKEHKNKYYLNNGFAFGVLDISSKGTG
FLQCFDESFKKDLLIENKNLKGANYKDIVAVKLLPLKKKRPSAKVILVLKRANETSLVIT
KRYGEAVLGMNIKTGLSTTLKASQKSLKALPLGTILKIENENNNIIEVLGHIDDESVDEK
ISLALFNKNNEFSDACIKEALANGDSVDASMYENRMDLRALPFCTIDPIHAKDFDDAIYF
DIQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIYFPHIAIPMLPRPLSENICSLKPHL
DRLAYCFKIALDHENKVIKEELFEGIINSKRRFNYDEVDEILIQKPDLKELSWLYELFEI
TKNLRKMRLKNAFEFRTEELRMNLDENLSLKSTVFEKDTPSHNLIEDCMLLANKAAAKLI
DIGVFRNHLSADARKIDKLLNELRELGIDVNFKPNLPELIRDIQALADELNLRAEVDKLI
IKAQKKAEYSSVNAGHFGLGFDKYSHFTSPIRRYSDLILHRLLKAKQKNDEKLFNYLLLN
IESTCENLSTLEREADKVAFDFMDRKFARWAAKNIGKKFKALVVQNDGVCIAKLDDEIKG
ADIILYDTRVNLLESVEVQIMEADIVMAKIYAKITQRLIKEENV
NT seq 1935 nt   +upstreamnt  +downstreamnt
gtgaaagaatttttaaacagtcttagttatggcattagctctcacgaagtaaacaatgaa
tttaaacaaattttaagagaacttttaaccaatcatatcattaaagaacataaaaacaaa
tactatcttaacaatggttttgcctttggagtacttgatatttcgagtaaaggcacaggt
tttttacaatgctttgatgaaagtttcaaaaaagatcttttgatagaaaacaaaaaccta
aaaggcgcaaactataaagatatagttgcagtaaaacttctacctttaaagaaaaaacgc
cccagtgcaaaggtgattttggttctaaaaagagccaatgaaacctctttagtgatcacc
aaaaggtatggcgaagccgtgcttggaatgaatatcaaaacaggattaagtaccacctta
aaagcttctcaaaaatccttaaaagcactacctttagggacaattttaaaaatagaaaat
gaaaataacaatatcatagaagttttaggacatatcgatgatgaaagcgtagatgaaaaa
atctccttagctctttttaataaaaataacgaatttagcgacgcttgtatcaaagaagct
ctagcaaatggtgatagcgttgatgcgagtatgtatgaaaatcgcatggatttaagagcc
ttgcctttttgcaccatagatcctatacatgcaaaagattttgatgatgcgatttatttt
gacatccaaaaacgagaaatttatgtagctattgctgatgttagcgaatatgtttatgct
tatagtgctatagataaagaagcaagaaatcgtggattttctatttattttccacatatt
gctatacctatgctaccgcgtcctttaagtgaaaatatctgttctttaaaacctcattta
gatcgcttagcgtattgttttaaaatcgcactcgatcatgaaaataaggtcataaaagaa
gaactttttgaaggtattatcaactcaaaacgccgttttaattacgatgaagttgatgaa
attttgatacaaaaacctgatttaaaagagctttcatggctttatgagctttttgaaatc
acaaaaaatttacgcaaaatgcgtcttaaaaatgcctttgaatttcgcactgaagaatta
agaatgaatttagatgaaaatttaagtctaaaaagcacagtttttgaaaaagacacgcct
tcgcataatttaatcgaagattgtatgcttttagccaataaagccgcggcaaaactcata
gatataggtgtttttaggaatcacttaagtgctgatgcaagaaaaatcgataagctttta
aatgaattacgcgaactaggcatcgatgtaaattttaaacccaatcttcctgaactcata
cgcgacatacaagctttagccgatgagttaaatttaagagcagaagtagataaactcatc
atcaaagcacaaaaaaaagcggaatattctagtgtaaatgcgggacattttggcttaggt
tttgataaatactcacattttacaagccctataagaaggtattctgatcttattttacac
agacttttaaaagccaaacaaaaaaacgatgaaaaactttttaattatctacttttaaac
atagaaagcacttgcgagaatcttagtacacttgaaagagaggcggataaggttgctttt
gattttatggatagaaaatttgctagatgggcggctaaaaatataggcaaaaaatttaaa
gctttagttgtgcaaaatgatggagtttgcatagctaaactagatgatgaaatcaaagga
gcggatataatcctttatgatacgcgtgtaaatttgctagaaagtgttgaagtgcaaatc
atggaagcggatatagttatggcaaaaatttatgctaaaatcacccaaagactcataaag
gaagaaaatgtatag

DBGET integrated database retrieval system