KEGG T01356: Calkr

Caldicellulosiruptor kristjanssonii: Calkr_2565

Entry

Calkr_2565 CDS T01356

Definition

helicase, recd/traa family (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

cki Caldicellulosiruptor kristjanssonii

Pathway

cki03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cki03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 PIF1 Helicase_RecD HHH_5 AAA_22 AAA_12 T2SE DUF2075 PhoH UvrD-helicase HHH_2 AAA DEAD DUF853 NTPase_1 AAA_28 AAA_29 AAA_23 Arch_ATPase ABC_tran AAA_16 ABC_ATPase AAA_25 MobB SRP54 AAA_15 AAA_14 ArgK HHH_3 DUF258 UvrD_C Mg_chelatase YopD TrwB_AAD_bind

Other DBs

NCBI-GI:

312794680

NCBI-GeneID:

9985252

UniProt:

E4S8Y5

Position

complement(2713922..2716147)

AA seq 741 aa
MQQNIQGMVSDIIYRNLENSYTVFEIICDDEVFTAVGIVPDIAIGEKVSVYGEFYVHPVY
GQQLKVSYLEKLLPQTKDEIYLYLSSGVIKGIGQKTAKKIVDTFGDDTARVLQEEPEKLL
QIRGMTPEKVERIRNMFAFQKFLKDIMSIFSQYGLSQNHAMRLFKLYGFSALSLLQENPY
FLLDVFPELDFKKVDRLALDMGVMPDDRRRISAKILNLLTLAANNEGHTCLPENRLKQLC
SKTLDLPVEKIEEALEALEVERRVVKDEVDSQDMVFLYGYYECERYIADKILSMLKEYDD
IADIDEKISMFEERNGIAFSPNQKKAIKMALTQGVSIITGGPGTGKTTIIKCIIQIFEGE
GKKVFLCAPTGRAAKRMQAACERESKTIHRLLEMTVLDTHVIFQKGPSNPLKCDVIIVDE
MSMVDSFLMNYLLAATKPSTRIVLVGDKDQLPSVGAGNVLKDLIKSEIVPCTTLTEVYRQ
SENSFIVLNAHRINRGEYPHLQKESDFYFIQKNSQEEILKTVVELVTKKLPNYLSCDPMT
DIQVLCPSKKGIVGMYNLNRVLQQHLNPPHPSKKEYAYKENLFRVGDKVMQIKNNYSLEY
EIVQGEEKGRGSTGIFNGDIGVVKDIDRAQGALEILFDDEKLVYYDFSLLDDLELAYAMT
VHKSQGSEFRCIVMPVVETYPILMTRNLLYTAVTRAKELVVLVGKKSALEYMIANQKEAM
RYSGLCDFLLRGQSNTQLQAL

NT seq 2226 nt +upstreamnt +downstreamnt
atgcagcaaaacatacagggtatggtgagcgatataatctacaggaatttggagaatagc
tatactgtgtttgagataatctgcgacgatgaggtgttcacggcagtaggaatagttccg
gacattgccatcggcgaaaaggtgagcgtttacggtgagttttatgttcatcctgtttat
ggtcagcagctgaaagtaagctaccttgaaaagcttttgccacagacaaaggatgagata
tatctttatctttcctctggagtgataaaaggtatcgggcagaagactgcaaagaagatt
gttgatacctttggggacgacactgcaagagtgctgcaagaagagcctgaaaagcttttg
cagattcgcggcatgacacccgaaaaggttgagcgaataagaaacatgtttgcattccag
aaatttttgaaagacatcatgtcaatcttttcccagtacggactttcacagaaccatgca
atgagactttttaaactttatggattttctgctctgtcgcttttgcaggaaaatccatat
tttcttttggacgtgttcccagaacttgactttaaaaaggttgacaggcttgcacttgac
atgggagttatgccggatgacagaagaagaatatctgctaagatactcaacctcttaact
ctggctgcaaacaacgaggggcacacctgcctgccagaaaatagactcaaacagctttgt
tcaaaaacccttgaccttccagtggaaaaaatagaagaggcacttgaagctttagaggta
gaaagaagagttgtgaaggatgaagttgactctcaagatatggtatttttgtacggctac
tatgaatgcgaaaggtatatagcagataaaatcctttcaatgctaaaagagtatgatgac
attgccgatatagatgaaaaaatttcaatgtttgaagagagaaacggcattgcattttca
ccaaatcagaaaaaagccatcaagatggcgctaactcaaggtgttagcatcatcacaggc
ggaccgggaactggtaagaccacaatcataaagtgcatcattcagattttcgagggtgaa
ggcaaaaaggtttttctttgcgcaccaaccggaagggctgcaaagaggatgcaggcagcc
tgcgaaagagaatcaaagacaatccacagacttttggaaatgacagttttggacacacat
gttattttccagaaaggaccaagcaatcctttaaaatgcgatgtcatcattgttgatgag
atgagcatggtagacagtttccttatgaactatcttcttgctgcaacaaagccgtcaacc
agaattgtgcttgttggagacaaagaccagcttccatcagttggtgcaggaaatgtcttg
aaagaccttataaaaagcgaaattgttccctgcactactttgacagaggtgtaccgccag
agcgaaaatagttttatagtcctcaacgctcacagaataaatagaggtgagtatccacac
cttcaaaaagagagcgatttttattttatccagaaaaactctcaggaagagattttgaaa
actgtggttgagcttgtgaccaaaaaacttccaaactatctttcgtgcgacccgatgaca
gacatccaggtcctgtgcccttccaaaaagggaattgttgggatgtacaacctaaaccgc
gtgctgcagcagcatctcaacccacctcatccatctaaaaaagagtatgcttataaagaa
aacctgttcagggttggagacaaggtcatgcagataaaaaacaactattcgctggaatat
gagattgtacaaggagaggagaagggcaggggctcaacagggatattcaatggcgatatc
ggagttgtcaaagacatcgacagggcgcaaggtgcgctggagattttgtttgacgatgaa
aagcttgtgtattatgacttttctctgcttgacgacctggagcttgcatatgccatgact
gttcacaaatcacaagggtctgaattcaggtgcatagtgatgcctgttgttgagacctac
cctattttgatgacaagaaaccttctgtatacggcagttacgcgtgcaaaagagcttgtt
gtgctggtgggcaaaaaaagtgcgcttgagtacatgattgcaaaccaaaaagaggctatg
cgatattcaggactttgcgactttttattgcgcgggcaatcaaatacgcaattgcaagct
ttatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (39)   
   Pfam (39)   
All databases (48)   

Download RDF

DBGET integrated database retrieval system