KEGG T00564: CKL

Clostridium kluyveri DSM 555: CKL_3670

Entry

CKL_3670 CDS T00564

Definition

exodeoxyribonuclease

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

ckl Clostridium kluyveri DSM 555

Pathway

ckl03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ckl03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 Helicase_RecD HHH_5 PIF1 PhoH AAA_22 DUF2075 UvrD_C NTPase_1 SRP54 T2SE DEAD AAA HHH_2 AAA_28 DUF258 AAA_12 DUF853 AAA_29 HHH_3 TrwB_AAD_bind CbiA ABC_tran UvrD-helicase AAA_5 Flavi_DEAD

Other DBs

NCBI-GI:

153956266

NCBI-GeneID:

5393591

UniProt:

A5N3G4

Position

complement(3711413..3713665)

AA seq 750 aa
MQELQGVVEDIIFQNKDNGYTVAKIKEKEDTITIVGCIPYIIEGQNLEVSGEWVVHPEFG
HQFKVKLFKEIIPDTLVGIEKYLSSGIISGIGPVTAKKIVEKFGKDTLHILDNNIERLKE
IEGIGSKKISLIEKSYCKQYEIRNIMIFMQTYGVTPNQCVKIYKKLGVNSINIVKENPYI
LTEEISGIGFKIADKIARGLGIEKDSPFRVQSGIKYLINKFCSRGNTYVPIDVLIRNGMS
ILGVSQKELEKNIYESSLNGKIKVEKYGDKICVFSMTYYYCELSVTKKILTLAFNKCKDI
DLNIYEEIKNFEKANNIKFAFSQKEAIKGSVENSVEIITGGPGTGKTTIINCMIQLFEKS
NLKVLMAAPTGRAAKRMSEATKREAKTIHRLLEIGVESDDEALFFSRGEESPLQCDVVII
DEASMIDIVMMNNLLKAISLKTRLIIVGDSEQLPSVGPGNVLRDLIDSRCIKVVRLKEIF
RQSRESMIIVNAHKINLGEMPILNKKLKDFYFIKALEFSNILNLLVELANKRLPAFNGHW
DKMKHIQILSPMRKGILGVSNLNRKLQEALNPKSNNKKEKYFRDMIFRVGDKVMQIKNNY
TLKWTVISGEKEEKGMGIFNGDFGYIEDIDEEKDTVTVIFDEEKRVVYDSICLDELDLAY
GITIHKSQGSEFPVIIVPMFMGPVLLMNRNLLYTAITRAKEMVVLVGDLRALTFMISNNK
SFERYSLLKYRIMDIMESEVDVTLEQNEFR

NT seq 2253 nt +upstreamnt +downstreamnt
atgcaggaattacagggagttgtagaagatataatatttcaaaataaggataatgggtac
acagtggctaagataaaagagaaagaagatacaataactatagttggatgtataccttat
ataatagaaggacaaaatttggaggtttcaggagagtgggtagttcatcctgaatttggc
catcaatttaaagttaaactgtttaaagagataattccagataccttagttggcatagaa
aagtatctgtcttcaggtattatatcaggcataggaccagttactgcaaaaaagatagta
gaaaagtttgggaaagatacactccatatattagataacaatatagaaaggttaaaagaa
atagagggcataggatcaaaaaagatatccttaatagaaaaatcttattgtaagcaatat
gaaataagaaatataatgatatttatgcaaacttatggagtaacccctaatcaatgtgta
aaaatatacaaaaagttgggagttaactcaataaatatagtaaaagaaaatccctatatt
cttacagaagaaatatcaggaataggattcaaaatagcagataaaatagcaagaggtctt
ggcatagaaaaggattctccctttagagtacaaagtggtataaaatatttaataaataaa
ttttgcagcagaggaaatacttatgtgcccatagacgtattgataagaaatggaatgagt
atacttggagtgagtcaaaaggaactggagaaaaatatatatgaaagctccttaaatgga
aaaataaaggtagaaaaatacggagataagatttgtgtattctccatgacatattattat
tgcgaattaagtgtaactaagaagatattgacattagcttttaataagtgtaaagatata
gatttaaatatatatgaggaaattaaaaattttgaaaaggccaataacataaaatttgct
ttttcacaaaaagaagcaattaaaggatcagtagaaaatagtgtagaaataataacagga
gggcctggaacaggaaagactactattattaattgtatgattcagttatttgaaaaatca
aacttgaaagtccttatggcggcacctactggaagggctgcaaagagaatgtcagaggca
actaaaagagaggcgaaaactatacatagattacttgaaataggtgtagaaagtgatgat
gaagcattatttttttctcgtggagaagaatctccccttcaatgtgatgtggtaattata
gatgaagcctctatgatagatatagtaatgatgaataatttattaaaagctatttcatta
aaaactagacttataatagtaggagattcagagcagcttccttctgtaggacctggaaat
gtacttagagatctgatagatagccggtgcattaaggtagtcagattaaaagaaatattt
agacagtcaagagagagcatgattatagtaaatgcccataaaataaatttaggagaaatg
ccgatcctaaataaaaaacttaaagatttttattttataaaagccttggaattctccaat
atattaaatcttctagtagaattagcaaataaaagattacctgcatttaatggacattgg
gataaaatgaaacacattcaaatactatctcccatgagaaaaggaattttaggagtatca
aatttaaatagaaaacttcaggaagctttaaatcctaaaagtaataataaaaaagaaaag
tattttagagatatgatttttagagttggagataaggtaatgcaaattaaaaataactat
actttaaagtggacagtaatttcaggagaaaaagaggaaaaaggtatgggcatttttaat
ggagattttggatatattgaagatattgatgaagagaaggatacagtaactgttatattt
gacgaagagaaaagagttgtatatgacagtatatgtttagatgaattagatttagcttat
ggaataactatacataaaagccaggggagtgaatttccagttattattgttcctatgttt
atggggccggttttacttatgaataggaatttactatatacagctataactagggcaaaa
gagatggtggtacttgtaggagatttaagagctttaacctttatgataagtaataataaa
agttttgagaggtattccttattaaaatatagaataatggatataatggagagtgaagtg
gatgttactttggaacaaaatgagtttcgctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (40)   

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