KEGG T00832: CKR

Clostridium kluyveri NBRC 12016: CKR_3240

Entry

CKR_3240 CDS T00832

Definition

hypothetical protein

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

ckr Clostridium kluyveri NBRC 12016

Pathway

ckr03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ckr03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 Helicase_RecD HHH_5 PIF1 PhoH AAA_22 DUF2075 UvrD_C NTPase_1 SRP54 T2SE DEAD AAA HHH_2 AAA_28 DUF258 AAA_12 DUF853 AAA_29 HHH_3 TrwB_AAD_bind CbiA ABC_tran UvrD-helicase AAA_5 Flavi_DEAD

Other DBs

NCBI-GI:

219856583

NCBI-GeneID:

7274420

UniProt:

B9DX48

Position

complement(3642915..3645176)

AA seq 753 aa
MSYMQELQGVVEDIIFQNKDNGYTVAKIKEKEDTITIVGCIPYIIEGQNLEVSGEWVVHP
EFGHQFKVKLFKEIIPDTLVGIEKYLSSGIISGIGPVTAKKIVEKFGKDTLHILDNNIER
LKEIEGIGSKKISLIEKSYCKQYEIRNIMIFMQTYGVTPNQCVKIYKKLGVNSINIVKEN
PYILTEEISGIGFKIADKIARGLGIEKDSPFRVQSGIKYLINKFCSRGNTYVPIDVLIRN
GMSILGVSQKELEKNIYESSLNGKIKVEKYGDKICVFSMTYYYCELSVTKKILTLAFNKC
KDIDLNIYEEIKNFEKANNIKFAFSQKEAIKGSVENSVEIITGGPGTGKTTIINCMIQLF
EKSNLKVLMAAPTGRAAKRMSEATKREAKTIHRLLEIGVESDDEALFFSRGEESPLQCDV
VIIDEASMIDIVMMNNLLKAISLKTRLIIVGDSEQLPSVGPGNVLRDLIDSRCIKVVRLK
EIFRQSRESMIIVNAHKINLGEMPILNKKLKDFYFIKALEFSNILNLLVELANKRLPAFN
GHWDKMKHIQILSPMRKGILGVSNLNRKLQEALNPKSNNKKEKYFRDMIFRVGDKVMQIK
NNYTLKWTVISGEKEEKGMGIFNGDFGYIEDIDEEKDTVTVIFDEEKRVVYDSICLDELD
LAYGITIHKSQGSEFPVIIVPMFMGPVLLMNRNLLYTAITRAKEMVVLVGDLRALTFMIS
NNKSFERYSLLKYRIMDIMESEVDVTLEQNEFR

NT seq 2262 nt +upstreamnt +downstreamnt
gtgagttatatgcaggaattacagggagttgtagaagatataatatttcaaaataaggat
aatgggtacacagtggctaagataaaagagaaagaagatacaataactatagttggatgt
ataccttatataatagaaggacaaaatttggaggtttcaggagagtgggtagttcatcct
gaatttggccatcaatttaaagttaaactgtttaaagagataattccagataccttagtt
ggcatagaaaagtatctgtcttcaggtattatatcaggcataggaccagttactgcaaaa
aagatagtagaaaagtttgggaaagatacactccatatattagataacaatatagaaagg
ttaaaagaaatagagggcataggatcaaaaaagatatccttaatagaaaaatcttattgt
aagcaatatgaaataagaaatataatgatatttatgcaaacttatggagtaacccctaat
caatgtgtaaaaatatacaaaaagttgggagttaactcaataaatatagtaaaagaaaat
ccctatattcttacagaagaaatatcaggaataggattcaaaatagcagataaaatagca
agaggtcttggcatagaaaaggattctccctttagagtacaaagtggtataaaatattta
ataaataaattttgcagcagaggaaatacttatgtgcccatagacgtattgataagaaat
ggaatgagtatacttggagtgagtcaaaaggaactggagaaaaatatatatgaaagctcc
ttaaatggaaaaataaaggtagaaaaatacggagataagatttgtgtattctccatgaca
tattattattgcgaattaagtgtaactaagaagatattgacattagcttttaataagtgt
aaagatatagatttaaatatatatgaggaaattaaaaattttgaaaaggccaataacata
aaatttgctttttcacaaaaagaagcaattaaaggatcagtagaaaatagtgtagaaata
ataacaggagggcctggaacaggaaagactactattattaattgtatgattcagttattt
gaaaaatcaaacttgaaagtccttatggcggcacctactggaagggctgcaaagagaatg
tcagaggcaactaaaagagaggcgaaaactatacatagattacttgaaataggtgtagaa
agtgatgatgaagcattatttttttctcgtggagaagaatctccccttcaatgtgatgtg
gtaattatagatgaagcctctatgatagatatagtaatgatgaataatttattaaaagct
atttcattaaaaactagacttataatagtaggagattcagagcagcttccttctgtagga
cctggaaatgtacttagagatctgatagatagccggtgcattaaggtagtcagattaaaa
gaaatatttagacagtcaagagagagcatgattatagtaaatgcccataaaataaattta
ggagaaatgccgatcctaaataaaaaacttaaagatttttattttataaaagccttggaa
ttctccaatatattaaatcttctagtagaattagcaaataaaagattacctgcatttaat
ggacattgggataaaatgaaacacattcaaatactatctcccatgagaaaaggaatttta
ggagtatcaaatttaaatagaaaacttcaggaagctttaaatcctaaaagtaataataaa
aaagaaaagtattttagagatatgatttttagagttggagataaggtaatgcaaattaaa
aataactatactttaaagtggacagtaatttcaggagaaaaagaggaaaaaggtatgggc
atttttaatggagattttggatatattgaagatattgatgaagagaaggatacagtaact
gttatatttgacgaagagaaaagagttgtatatgacagtatatgtttagatgaattagat
ttagcttatggaataactatacataaaagccaggggagtgaatttccagttattattgtt
cctatgtttatggggccggttttacttatgaataggaatttactatatacagctataact
agggcaaaagagatggtggtacttgtaggagatttaagagctttaacctttatgataagt
aataataaaagttttgagaggtattccttattaaaatatagaataatggatataatggag
agtgaagtggatgttactttggaacaaaatgagtttcgctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (40)   

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