KEGG T01448: Clole

Clostridium lentocellum: Clole_3601

Entry

Clole_3601 CDS T01448

Definition

helicase, RecD/TraA family (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

cle Clostridium lentocellum

Pathway

cle03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cle03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 PIF1 Helicase_RecD HHH_5 AAA_28 T2SE AAA_22 HHH_2 UvrD-helicase DUF2075 DUF258 AAA_16 AAA AAA_25 PhoH SRP54 ABC_tran AAA_29 AAA_10 Ribosomal_S13 AAA_18 TrwB_AAD_bind NTPase_1 DEAD ArgK UvrD_C cobW AAA_23 SMC_N AAA_5 Zeta_toxin AAA_14 ResIII Mur_ligase_M AAA_17

Other DBs

NCBI-GI:

326792661

NCBI-GeneID:

10333356

UniProt:

F2JT65

Position

complement(3917958..3920207)

AA seq 749 aa
MVLEATIEDIIYQNAENGYTVCTIEYEGEELSCVGEMAGIYAGEEVKIVGSWSTHPIYGR
QIRVEMLERSMPKTVQGMEKYLASGVIKGIGAKTAKKIVKHFGLDTFRIIEEEPLVLAQV
SGISEKKAQEIGEIFHTQYELRRAMLFLQEYGITPTYAIKIYKQYKDKTTEVVKNTPYRL
VDDIFGIGFKKADEIAFKVGIARDDPHRIKTGILYVLNSFSANGHTYVPRNKLLEEAMKL
LLPNEYNDYVQADEYEHPLLENALLELTLSKQIIIKNYDEVPCIFLSYLYYSEQAVARKL
IDLAALYQADSQLDVEKELINTQKELKIELVEEQKEAVRQVLTQGVTVITGGPGTGKTTT
INAILHMLEKAGEDVLLAAPTGRAAKRMSEATGMEAQTIHRLLEINYMREDANKQMFSRN
EENPLEADVIVVDEMSMVDITLMHALMKAVVEGQRLVLIGDADQLPSVGAGNVLKDIIKS
GRISTVRLVQIFRQASKSAIVMNAHRINKGEYPICNEKGTDFFYMKRSMQEEVKETIIEL
ITTRLPKYQGFDSLKDIQILAPMRKGVVGVNELNKAVQEALNPHHQLKPEKEYRGTLFRE
GDKVMQIKNNYNTPWKILGKSGMPIDEGTGVFNGDCGIITSIKEEAELLVVTFDDLKVVE
YEFNQLDELELAYAITIHKSQGSEYPVVILPIHSGPPMLLNRNLLYTAVTRAKKMVVGVG
LTETMERMVDNNKEIERYSSLAKHLAVML

NT seq 2250 nt +upstreamnt +downstreamnt
gtggttttagaagcgacaatagaagatataatttatcaaaatgcagaaaatggttatact
gtttgtaccatagagtacgaaggagaagagctttcttgcgtgggagaaatggcaggtatt
tatgccggagaagaagttaaaattgtaggaagctggagcacacatcccatatatggaagg
caaataagagtagaaatgctagagagaagtatgcctaagacagtacaaggaatggaaaaa
tatctagcttctggtgttattaaaggcataggggccaagacagcaaagaaaattgtcaag
cattttgggttagatacttttagaataattgaggaagaaccactcgtacttgctcaagta
agtggcattagtgaaaaaaaagcacaagaaatcggagaaatttttcatacccagtatgaa
ttgagacgtgctatgctatttttacaagaatatgggattacacctacttatgcgattaaa
atatataagcagtataaagataagactacagaggtcgttaagaatacgccttatcgttta
gtggatgatatatttggtattggctttaagaaagcagatgagattgcttttaaggtgggg
atagcaagagatgaccctcatcgtataaaaacaggtattttatatgtacttaatagtttt
tcagctaatggacatacttatgtccctagaaataaattgttagaagaagccatgaaacta
ttactaccaaatgaatataatgattatgtacaagcagatgaatatgagcatccattactt
gaaaatgcacttttagaacttaccttatctaaacaaattattattaagaattacgatgag
gtaccttgcatattcctttcatatctttattacagtgaacaggctgtagctagaaaactt
attgatttagctgctctgtatcaagcagatagtcagttagatgtagaaaaagagctgatt
aatacacaaaaggaactaaaaattgaattagtagaagaacaaaaagaagctgttagacaa
gtacttactcaaggggtgactgtgattacaggagggccaggaacaggaaagactactacg
attaatgctattttacacatgctagaaaaagctggtgaagatgtgctcttagctgcacct
actggaagagcagctaaacgcatgagtgaagccactggtatggaagcacagacaattcat
agacttttagaaattaattacatgagagaagatgccaataagcaaatgtttagtcgtaat
gaagaaaatccattagaggcggatgttattgtagtagatgagatgtcgatggtagatatt
actttgatgcatgctttgatgaaagctgtagtggaaggacaacgcttagtacttattgga
gatgcagaccagctaccgtctgtaggagcaggaaatgtcttaaaagatattattaaaagt
ggcaggatttcaacagtaagattagtacagatttttagacaagcttctaagagtgctatt
gttatgaatgctcaccgtattaataaaggtgaatatcctatatgtaatgaaaaaggaaca
gatttcttctatatgaaacgtagtatgcaagaagaagttaaagagactattatagagctg
attacaaccagattgcctaaataccagggctttgatagcctgaaagatattcaaattttg
gcacctatgcgtaagggagtagttggcgttaacgaacttaataaagctgttcaagaagcc
ttgaatccacatcatcaattgaaacctgagaaagaatacagaggcaccttatttagagaa
ggtgataaagtgatgcaaatcaaaaataattataacacaccttggaaaatattaggtaaa
agtggtatgcctatagacgagggaacaggtgtatttaatggagattgtgggattattacc
agtattaaagaagaagcagaattattagtagttacttttgatgatttaaaagtagtagaa
tatgagtttaaccaattagatgaactagagttagcttatgctattaccatccataaatct
caaggaagcgagtatccagtagtcattttacctattcatagtgggccacctatgcttctc
aataggaatttattatatacagcagtaactcgtgctaaaaaaatggtagtaggtgtagga
cttactgaaactatggaacgtatggtggataacaataaagaaatagaacgttattcaagt
cttgctaagcaccttgcagtcatgttgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (40)   
   Pfam (40)   
All databases (49)   

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