KEGG   Cellulophaga lytica HI1: IX49_00975
Entry
IX49_00975        CDS       T03279                                 
Name
(GenBank) DNA recombination protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
clh  Cellulophaga lytica HI1
Pathway
clh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:clh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    IX49_00975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clh03400]
    IX49_00975
DNA repair and recombination proteins [BR:clh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     IX49_00975
SSDB
Motif
Pfam: SMC_N AAA_15 AAA_23 AAA_21 AAA_27 AAA_29 MukB SbcC_Walker_B RsgA_GTPase
Other DBs
NCBI-ProteinID: AIM59171
Position
221770..222849
AA seq 359 aa
MLLKKLSLVNYKNFDSKEFDFDAKINCFVGSNGVGKTNILDAIYHLSFGKSYFNPIASQN
IKHGEDFFVVDGLFFKNDREEKIICSLKKGAKKVIKKNGKAYDKFSDHIGFLPLVIISPA
DRDLILEGSDTRRKFIDGVISQSNKEYLTALLKYNKILLQRNSLLKYFAVNHTFDKTTLS
VYNEQLQEYGTIIHKERVAFLNEFIPIFKEQYAAISGGKEDVTITYNSKLLDKDLLQLFN
ESLEKDRAVQYTTVGTHKDDLSFEINNYPVKKFGSQGQQKSFLIALKLAQFNFIKAQAKT
TPILLLDDIFDKLDENRVAQIVSLVDDDNFGQIFISDTHADRTENVVKNIHQSYKIFKI
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgcttttaaagaaattatcgcttgtaaattataaaaattttgactctaaagaatttgat
tttgacgctaaaataaactgctttgttggcagtaatggcgtaggaaaaacaaatatttta
gatgctatttaccatttatcttttggcaaaagttactttaatcctattgcgtcacaaaat
ataaaacacggtgaagatttttttgttgttgatggattgttttttaaaaacgatagggaa
gaaaaaattatttgcagtttaaaaaaaggtgctaaaaaggttattaaaaaaaatggtaag
gcatatgataagttttctgaccatattggttttttaccgttggtaattatttctccggca
gaccgcgaccttattttagaaggtagtgacacaagacgtaagtttatagacggtgtaata
tctcaatctaataaagaatatttaactgctcttttaaaatataataaaatacttttacaa
cgtaattctcttttaaaatactttgctgtaaaccatacttttgacaaaactacactaagt
gtttataatgagcaattacaagaatatggtacaattatacacaaagaacgtgttgcattt
ttaaatgaatttattcctatttttaaagaacaatatgctgcaatatctggcggaaaagaa
gatgtaacaattacatacaacagcaagctactagacaaagatttactgcaattatttaat
gaaagtttagaaaaagatagggctgtgcaatacactacagttggtactcataaagatgat
ttgtcttttgaaattaacaattaccctgtaaagaaatttggtagccaagggcagcaaaaa
tcctttttaatagccttaaaactggctcaatttaactttattaaagcgcaagcaaaaaca
actcctattctattgttagacgatatttttgacaagttagatgaaaaccgcgtagcacaa
attgtatctttagtagatgacgataattttggacaaatttttattagtgatacgcacgca
gaccgaactgaaaatgtggtaaaaaatatacaccagagttacaaaatatttaaaatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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