KEGG T00766: Clim

Chlorobium limicola: Clim_0501

Entry

Clim_0501 CDS T00766

Gene name

trpA

Definition

tryptophan synthase subunit alpha (EC:4.2.1.20)

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

cli Chlorobium limicola

Pathway

cli00260	Glycine, serine and threonine metabolism
cli00400	Phenylalanine, tyrosine and tryptophan biosynthesis
cli01100	Metabolic pathways
cli01110	Biosynthesis of secondary metabolites
cli01230	Biosynthesis of amino acids

Module

cli_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:cli00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cli00400]

SSDB

Motif

Pfam:

Trp_syntA His_biosynth Peripla_BP_4 BtpA PcrB

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

567835..568638

AA seq 267 aa
MKQNRIASLVEQDKKLLVAYYMPEYPVAGATLPVLEALQENGADIIELGIPFSDPVGDGP
VIQEAAQRAIRNGVTVKNLLETVHNARRGAGCKAITVPIILMGYCNPLIAYGGDCFLNDA
VEAGVDGLLLPDLPPEEAEDFLERAKSFGLTVVFLISPVTPPDRIEMIDSLSTDFSYCLA
VNATTGTAKLAGEDADAAIEEYLKRVRQHTRKKFVVGFGIRDKARVMQMWKLADGAVVGT
ALLQRLAAAHTPGETARLAGEFWQALR

NT seq 804 nt +upstreamnt +downstreamnt
atgaaacagaatcgtatcgcttcgcttgtcgagcaggataaaaaactgcttgtcgcttat
tatatgcctgaatatccggtagcgggagcaacccttccggtgctcgaagccctccaggaa
aacggtgcggatattatcgaactcggtattcctttttccgatcccgtcggtgatggtccg
gttatacaggaggctgcacaaagagctatcaggaacggcgtaaccgttaaaaatcttctc
gaaacggtgcacaacgcccgacggggtgcagggtgtaaggcaattacggttcccatcatt
ctcatggggtactgcaatccgctgatcgcctacggaggggactgttttctgaatgatgcc
gtcgaggcgggcgttgacgggcttctgcttcccgatctcccgcctgaagaggccgaagat
tttcttgaaagggcaaaaagcttcgggttgaccgtggtttttctcatctcgccggttact
ccgcccgaccggatcgagatgatcgattctctttcgacggatttttcctattgtctggca
gtcaatgccacaaccggtaccgccaaacttgccggagaggatgcagatgccgcgatcgag
gagtatctcaaacgggtcaggcagcatacccggaaaaaatttgtcgtaggtttcggtatc
agggacaaggccagagtcatgcagatgtggaagcttgcagacggagccgttgtggggaca
gcacttctgcagcgccttgccgcggcccatacgcctggggaaactgcccgtcttgccgga
gagttctggcaggcactccgataa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CLI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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