KEGG   Chlorobium limicola: Clim_0501Help
Entry
Clim_0501         CDS       T00766                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha (EC:4.2.1.20)
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
cli  Chlorobium limicola
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:cli00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Clim_0501 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Clim_0501 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Clim_0501 (trpA)
Enzymes [BR:cli01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Clim_0501 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
567835..568638
Genome map
AA seq 267 aa AA seqDB search
MKQNRIASLVEQDKKLLVAYYMPEYPVAGATLPVLEALQENGADIIELGIPFSDPVGDGP
VIQEAAQRAIRNGVTVKNLLETVHNARRGAGCKAITVPIILMGYCNPLIAYGGDCFLNDA
VEAGVDGLLLPDLPPEEAEDFLERAKSFGLTVVFLISPVTPPDRIEMIDSLSTDFSYCLA
VNATTGTAKLAGEDADAAIEEYLKRVRQHTRKKFVVGFGIRDKARVMQMWKLADGAVVGT
ALLQRLAAAHTPGETARLAGEFWQALR
NT seq 804 nt NT seq  +upstreamnt  +downstreamnt
atgaaacagaatcgtatcgcttcgcttgtcgagcaggataaaaaactgcttgtcgcttat
tatatgcctgaatatccggtagcgggagcaacccttccggtgctcgaagccctccaggaa
aacggtgcggatattatcgaactcggtattcctttttccgatcccgtcggtgatggtccg
gttatacaggaggctgcacaaagagctatcaggaacggcgtaaccgttaaaaatcttctc
gaaacggtgcacaacgcccgacggggtgcagggtgtaaggcaattacggttcccatcatt
ctcatggggtactgcaatccgctgatcgcctacggaggggactgttttctgaatgatgcc
gtcgaggcgggcgttgacgggcttctgcttcccgatctcccgcctgaagaggccgaagat
tttcttgaaagggcaaaaagcttcgggttgaccgtggtttttctcatctcgccggttact
ccgcccgaccggatcgagatgatcgattctctttcgacggatttttcctattgtctggca
gtcaatgccacaaccggtaccgccaaacttgccggagaggatgcagatgccgcgatcgag
gagtatctcaaacgggtcaggcagcatacccggaaaaaatttgtcgtaggtttcggtatc
agggacaaggccagagtcatgcagatgtggaagcttgcagacggagccgttgtggggaca
gcacttctgcagcgccttgccgcggcccatacgcctggggaaactgcccgtcttgccgga
gagttctggcaggcactccgataa

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