KEGG   Chlorobium limicola: Clim_0809
Entry
Clim_0809         CDS       T00766                                 
Name
(GenBank) sodium ion-translocating decarboxylase, beta subunit
  KO
K20509  carboxybiotin decarboxylase [EC:7.2.4.1]
Organism
cli  Chlorobium limicola
Pathway
cli00362  Benzoate degradation
cli00620  Pyruvate metabolism
cli00650  Butanoate metabolism
cli01100  Metabolic pathways
cli01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:cli00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00620 Pyruvate metabolism
    Clim_0809
   00650 Butanoate metabolism
    Clim_0809
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    Clim_0809
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cli02000]
    Clim_0809
Enzymes [BR:cli01000]
 7. Translocases
  7.2  Catalysing the translocation of inorganic cations
   7.2.4  Linked to decarboxylation
    7.2.4.1  carboxybiotin decarboxylase
     Clim_0809
Transporters [BR:cli02000]
 Other transporters
  Primary active transporters [TC:3]
   Clim_0809
SSDB
Motif
Pfam: OAD_beta ATP-synt_ab_Xtn NQRA RnfC_N DUF2118
Other DBs
NCBI-ProteinID: ACD89889
UniProt: B3EI59
Position
885666..887216
AA seq 516 aa
MRKILFLMLSLLCFTTAGYAQSFFQTEEGIVTLAVPEDLELVKVPVRDSRMLKVGDDVRQ
GDFLGLFADQHHNKITVSAGVSGHVTYVNESLYNKYTRVPAGAVLLKIEKQDLLTSVQGS
DATTERLSLSIVFKNLIESTGIYALIVDNRLTWTEGLGRILMMSVGALLIYLAIAKGFEP
LLLIPIGMGAVFSNIPLAYINDEGGILYYVFNVGIQSGVFPLLIFMGVGAMTDFGPMIAN
PKTSLLGGAAQLGIFGTLIGALLLTQYVPGINFSMKDAASIGIIGGADGPTSIFVASRLS
PALLGSIAVAAYSYMALVPIIQPPIMKWLTTEEERKIKMSQLRYVSKREKILFPIIVILL
CALLLPSAAPLIGFLMFGNLMRECGVVERLSDTAQNSLINIVTIFLGLGVGSKLSAEKFL
NIETLGIIVLGLIAFSLGTAGGVLMAKFMNLFLKQKINPLIGSAGVSAVPMAARVSNKVG
LDADPHNFLLMHAMGPNVSGVIGSAVAAGVLLAVFM
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgcgtaaaattctttttctgatgctttccctgctgtgcttcacgacggcggggtatgcg
caaagtttttttcagaccgaagagggcattgtaacccttgcggtgcctgaagatctcgaa
ctggtgaaagttcctgtgcgcgacagccggatgctgaaagtaggcgacgatgtccgtcag
ggcgattttctcggactgttcgccgaccagcaccacaacaagatcacggtgagcgccggt
gtgtcggggcatgttacctacgtcaacgaaagcctctacaacaagtataccagggttccc
gccggtgcggtgctgctgaagatagagaagcaggatttgctgaccagcgtgcagggttcc
gatgctacaaccgaacgactctctctgtcgatagtttttaaaaaccttattgaaagtacc
ggtatttacgctctgatcgtcgataacaggctgacctggaccgagggtctcggacgcatt
ctcatgatgagcgtcggcgctctgctgatctacctggccatcgcaaaagggttcgagccg
ctgctgctgattcctattggcatgggtgcggttttttccaatattccgcttgcctacatc
aacgacgagggtggtattctctactatgttttcaatgtcggtatccagagcggcgtcttt
cccctgcttatcttcatgggtgtcggtgccatgaccgacttcggccccatgattgccaac
ccgaaaacaagtctgctcggcggcgccgcacagctcggtattttcggaaccctgatcggc
gccctgctgcttacgcagtatgtgccgggcatcaacttttccatgaaggatgccgcttcg
atcggtattatcggcggtgctgatggtcctacctccatttttgttgcctcacgcctcagc
ccggccctgctcggcagtatcgccgttgcagcttactcctatatggcgcttgtgccgatc
attcagccgcccatcatgaagtggcttaccaccgaggaggagcgcaaaatcaagatgagc
cagctccgttatgtttcgaagcgtgagaagatcctttttccgatcatcgtcatcttgctt
tgcgctttgctgctgccttctgctgcacccctgatcggttttctcatgttcggcaatctc
atgcgggagtgcggtgttgtcgagaggctcagcgatacggcccagaactcgctcatcaac
atcgtaaccatttttcttgggcttggcgtcggcagcaagctttccgccgagaagtttctc
aatatcgagacgctcggtatcatcgtgctcggccttatcgccttctcgctcggcacggcc
ggaggcgttctgatggcgaagttcatgaaccttttcctgaagcagaaaatcaatccgctg
atcggttcggccggcgtgtcggcggtgccgatggccgcacgcgtatcgaacaaggtcggt
ctcgatgccgatccgcacaacttcctgctcatgcatgccatgggtccgaacgtttcggga
gttatcggttcagccgtggctgccggcgtgcttcttgctgtattcatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system