KEGG C.limicola: Clim

Chlorobium limicola: Clim_1797

Entry

Clim_1797 CDS C.limicola

Definition shikimate 5-dehydrogenase

Orthology K00014 shikimate 5-dehydrogenase [EC:1.1.1.25]

Pathway cli00400 Phenylalanine, tyrosine and tryptophan biosynthesis
cli01100 Metabolic pathways

Class Metabolism; Amino Acid Metabolism; Phenylalanine, tyrosine and
tryptophan biosynthesis [PATH:cli00400]

SSDB

Motif Pfam: Shikimate_dh_N Shikimate_DH

Other DBs NCBI-GI: 189347286
NCBI-GeneID: 6354626
JGI: Clim1797
UniProt: B3EEM6

Position 1976557..1977444

AA seq 295 aa
MKPSKQILGLIGRNVGYSWSPLIHNTACELLGLPFIYTIFNIAEPQRLDDALRGARALGI
AGFNVTIPYKQDVVPLLDHLAEEAASIRAVNTIVNIDGKLTGYNTDIEGFAAPLLSCRDS
IAGMPVSVFGSGGASLAAIEAFRRYFKPSIIYLFVRDLFKAIRMLESYDHKETISICLID
DLHAGKNSTREHFGSSRVIVNATPIGTRGRTGDDVSCIVPLEKNLLHDSQIVYDMVYNPL
RTPLLRAAELAGAKTITGIEMLIGQAARSFTLWTGEIMPVEEVRTQLIRHIETGT

NT seq 888 nt +upstreamnt +downstreamnt
atgaagccctcaaagcaaatcctcggccttatcggcagaaatgtcggatactcgtggtca
ccgcttatccacaacaccgcatgcgagttgctcgggcttccgtttatctataccattttc
aatatcgccgaaccgcaacggctcgacgatgcccttcggggagcgagggctctcggcatt
gccggtttcaacgttaccattccctataaacaggatgtcgtgcccctgcttgaccatctg
gcagaggaagccgcctccatccgggcggttaacaccattgtcaacatcgacggaaaattg
accggatacaacaccgacatcgaaggctttgccgctcccctgctttcttgccgcgacagc
attgcaggcatgcctgtctccgttttcggatcgggaggagcatctctggcggccatcgaa
gcattcaggcgttattttaagccctcgatcatctatctttttgtcagagaccttttcaag
gcgattcgcatgcttgaaagctacgaccataaagagaccatttcgatctgcctcatcgac
gatctccatgcagggaaaaacagcacaagagagcacttcggaagcagccgcgtcattgtc
aatgccactccaatcggaacccggggaagaaccggcgacgacgtcagctgcatcgtgccg
cttgaaaagaatctgctgcacgacagccagatcgtttacgatatggtgtacaatcccctc
cgcactccgctgctacgtgcagcagagctcgccggagcgaaaacgataacgggcatcgaa
atgctgatcgggcaggctgcccgctcctttacactctggactggcgaaatcatgccggtt
gaggaggtcagaacacagctgatccgtcacattgaaacgggaacataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-CLI (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)

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