KEGG T00766: Clim

Chlorobium limicola: Clim_2507

Entry

Clim_2507 CDS T00766

Definition

UDP-N-acetylmuramyl tripeptide synthetase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

cli Chlorobium limicola

Pathway

cli00300	Lysine biosynthesis
cli00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:cli00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:cli00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase LpxD DUF1611 AAA AAA_17

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2746840..2748402)

AA seq 520 aa
MTSGLYPLPFQEPLPLSAIVRELDVLEMAGTEDAERMIVSLAADSREVLPGSLFVAIRGF
AFDGHRYISEAVRSGAAAVICEALPEDNGSGAVYIRVADSRRALAAAARAFYRNASERIF
LIGVTGTNGKTTTARLIADMLNSCGIPAGYIGTNLCRIAGRDISLDRTTPEAHELQALFR
RMLDAGCQAAVMEVSSHALVLDRVSGLRFRCAVFTNLSMEHLDFHQTMAGYADAKQILFD
QLDPEGFAVFNIDDPYASQMASRVAADKRFCCTLKPQRELTLRCGRSFSAAVSSRTLGSA
SVELHFPDAVHTVQTELPGMYNVMNLLEAAAVLSGMGIAPGHVAAVLGKPFRVEGRMERI
WDTEKSRCAFVDYAHTPDALEKALSALGELKSSDARLVVVFGCGGNRDRLKRPEMGRIAS
EKADFVFLTSDNPRDENPEFILDEIECGMEGSNYRRITGREEAIREAAATLLPGDILLVA
GKGHETYQEIAGIKHFFSDQEILRECLQNGSLMAPEKERA

NT seq 1563 nt +upstreamnt +downstreamnt
atgacatccggattgtacccattgccatttcaggaacccttgccgctttcggcaatcgtt
cgggagcttgacgttctggagatggccggtaccgaggatgcggagcggatgatcgtttcg
ctggccgcagattcgagggaggttctgccaggttctctgtttgttgctattcgcgggttt
gctttcgacggacatcgttatatatctgaagctgtccggagtggagctgcggcggttatc
tgcgaggccctgcccgaagataacggatcaggggctgtgtatataagagttgcggattcg
cgtcgtgcgcttgctgcggctgccagagcattttaccggaatgcatccgaacggattttc
cttatcggtgtgaccggaaccaacggcaaaacgaccacggctcgtctgattgccgatatg
ctcaactcatgcggtattcctgccggttatatcggaacgaatctctgccgcatcgcaggg
agagatatctccctcgatcgaacaacccctgaagcccatgaactgcaggcgctgtttcgc
aggatgctcgatgcgggttgtcaggctgcggtgatggaggtctcttctcatgcgctggta
cttgacagagtcagcggtctgcggtttcgctgtgcggtttttaccaatctgagtatggag
catcttgattttcatcagaccatggcaggatatgccgatgcgaagcagattctgttcgat
cagcttgatccggaaggatttgccgttttcaacattgacgatccttatgcgtcgcagatg
gcatcgagagtggctgcagataaacggttctgctgtaccctgaagccgcaaagagagctg
acattgcgttgcggcagaagtttttccgcggccgtatcctccagaactctgggttcggca
tccgtcgaactgcattttccggacgcggtccataccgtgcagaccgagcttccggggatg
tacaatgtgatgaatctgcttgaagctgctgccgtgctttccggaatgggaatagcgccg
ggacatgtcgccgcagtgctcggcaaaccgttccgggtcgaaggccgtatggaacggata
tgggataccgaaaaatcacgctgcgcttttgttgattatgcgcataccccggacgctctc
gaaaaggcgctttctgcactcggggaactcaagtcctcagatgcccgcctggttgttgtg
ttcggttgcggcggtaaccgtgaccgtctgaaaaggcctgagatgggccgtattgcgtca
gaaaaagctgattttgtttttcttacatctgataatccaagggacgagaatcccgaattc
attctggacgaaattgaatgcggcatggaagggagcaattatcgaaggataaccggcagg
gaggaagccatcagggaggcagcggcaacgcttttgccgggggacatattgcttgtggca
ggaaagggtcatgaaacgtaccaggaaattgccggaataaagcattttttttccgatcag
gagattctcagggagtgtctgcagaatgggagccttatggctccggaaaaggagcgtgca
tga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CLI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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