KEGG   Clostridium ljungdahlii: CLJU_c31970Help
Entry
CLJU_c31970       CDS       T01276                                 

Gene name
hemD
Definition
(GenBank) porphyrin biosynthesis protein HemD
  KO
K13542  uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
Organism
clj  Clostridium ljungdahlii
Pathway
clj00860  Porphyrin and chlorophyll metabolism
clj01100  Metabolic pathways
clj01110  Biosynthesis of secondary metabolites
clj01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:clj00001]
 Metabolism
  Metabolism of cofactors and vitamins
   00860 Porphyrin and chlorophyll metabolism
    CLJU_c31970 (hemD)
Enzymes [BR:clj01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.107  uroporphyrinogen-III C-methyltransferase
     CLJU_c31970 (hemD)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.75  uroporphyrinogen-III synthase
     CLJU_c31970 (hemD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: HEM4 TP_methylase
Motif
Other DBs
NCBI-ProteinID: ADK16244
UniProt: D8GQT9
Position
complement(3496789..3498249)
Genome map
AA seq 486 aa AA seqDB search
MGKVYLIGAGPGDEELITLKAVRKLSECTAVMYDRLAGPGILKYVNEDCEIYYCGKEPGC
HYKNQDEINNMLVELAKKGHVVGRIKGGDPYVFGRGGEEALALLKENIEFEVIPGITSPI
SALNYAGIPVTHRKVARSFHIFTGKTAEKLDINWEAAAKIGGTLIFLMGFRNLEVICSKL
KENGMDENTPCAVVMRGTTSKQKKVVGKIKDIKEKAEEAGLTSPCIIVIGDVIKFNEQLD
WYEKKPLFGKNVCITRSKAQSREMREKLLDLGAQVTEIHSIEIKYTSENIKEYLDKLLEY
DYIIFTSVNGVNSFFERLLTENYDIRNIKGKFAAIGPATERAIKSKGIIPEIVAEKFVAE
SLHDKMKGFIKKGDKVFIPRSKNARPYLAEALREEGCIVDECYTYETVAGSLTDKNCFND
VDTVIFTSPTTVRNMIELVGLSAIKEKQVISIGPITGKELKKHDIDYEMSEEYTTDGVIK
QLLEGK
NT seq 1461 nt NT seq  +upstreamnt  +downstreamnt
atgggaaaagtttatcttattggtgcaggacctggagatgaggaacttataactttaaag
gcagtgagaaaattaagtgaatgtactgcagttatgtatgacaggttggcaggccctgga
attttaaaatatgtaaatgaggactgtgaaatatattactgtggtaaggaaccaggatgc
cattataaaaatcaagatgaaataaataacatgttagttgaacttgctaaaaagggacat
gtagtaggaagaattaaaggcggagatccctatgtatttggaagaggaggagaagaagcg
ctggctcttttaaaagaaaatatagagtttgaggtcataccgggaataacttctccaata
tcagccttaaattatgcaggaatacctgtaactcatagaaaggtagctcgaagctttcat
atctttacaggaaagactgctgaaaagctggatataaattgggaagctgcagctaaaata
ggaggaacactgattttcctaatgggatttagaaacttggaagtaatatgcagcaagctt
aaggaaaatggcatggatgaaaatactccttgtgccgtagttatgaggggaactacttca
aagcagaaaaaagttgtaggaaaaataaaagacataaaagaaaaagctgaagaggcagga
ctaacttctccctgcataatagttataggagatgttataaaattcaatgagcagcttgat
tggtatgagaaaaagcctctctttggaaaaaatgtatgtatcacaaggtcaaaggctcag
tcacgtgaaatgagagaaaaacttcttgatttaggagctcaggttactgagatacattcc
atagaaataaaatatacttcagaaaatatcaaagaatatttagataaattgctggagtat
gattatattattttcaccagcgtaaatggggtgaacagcttttttgaacgacttctaacc
gaaaattatgatattagaaatataaaaggaaaatttgcagctataggccctgccacagaa
agagctataaaaagtaagggaattatacctgaaatagtagcagaaaagtttgtagctgaa
agtctccacgataaaatgaaaggtttcataaaaaaaggagacaaggtatttattccaaga
tctaaaaatgcaagaccttatttggcagaagccttgagagaagaaggctgcatagtagat
gaatgttatacttatgagacagtagctggaagcttaactgataaaaattgtttcaatgac
gtagatacagttatttttacaagtccaactacagttagaaacatgatagaacttgtaggg
ctttctgctataaaggaaaaacaggtaatttctataggacctataacaggtaaagagctg
aaaaagcatgatatagattatgaaatgtctgaagaatatactacagacggagttataaaa
caactattagaagggaagtaa

DBGET integrated database retrieval system